Gene detail information of Glyur000699s00025413.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G30960.18.00E-131SOS3-interacting protein 3
NRXP_004507724.10PREDICTED: CBL-interacting serine/threonine-protein kinase 6-like [Cicer arietinum]
COGYP_003797670.12.00E-21putative serine/threonine protein kinase [Candidatus Nitrospira defluvii]
Swissprottr|O65554|CIPK6_ARATH6.00E-163CBL-interacting serine/threonine-protein kinase 6
trEMBLtr|C0IRD0|C0IRD0_CICAR0CBL-interacting protein kinase 6 {ECO:0000313|EMBL:ACC96114.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006995507256607+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0007165  signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000699s00025413.1PF00069.20Pkinase1403142.20E-48
Glyur000699s00025413.1PF03822.9NAF3474062.30E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control217.690
SRR1783600control219.701
SRR1783602moderate drought stress185.367
SRR1811619moderate drought stress184.662

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain202.404
DRR006520Root Summer glycyrrhizin high producing strain201.002
DRR006521Root Winter glycyrrhizin high producing strain180.589
DRR006522Root Winter glycyrrhizin high producing strain176.543
DRR006523Root Summer glycyrrhizin low producing strain423.981
DRR006524Root Summer glycyrrhizin low producing strain425.680
DRR006525Leaf Summer glycyrrhizin high producing strain81.333
DRR006526Leaf Summer glycyrrhizin high producing strain82.691

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)134.652
SRR2868004Drought Stress(Tissue:root)146.678
SRR2967015Control (Tissue:root)122.723

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave78.516
SRR9715740Leave58.724
SRR9715741Leave69.950
SRR9715739Root280.153
SRR9715742Root177.142
SRR9715743Root190.972

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h85.276
SRR8749028MeJA induced 9h136.201
SRR8749029MeJA induced 9h82.544
SRR8749030Uninduced43.326
SRR8749031Uninduced12.988
SRR8749032Uninduced26.946

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root136.947
SRR8400027Control-Root200.799

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved