Gene detail information of Glyur000699s00025418.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G24270.40aldehyde dehydrogenase 11A3
NRXP_003610350.10NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [Medicago truncatula]
COGYP_007420085.10NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [Bacillus thuringiensis serovar kurstaki str. HD73]
Swissprottr|P93338|GAPN_NICPL0NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
trEMBLtr|G7JGT0|G7JGT0_MEDTR0NADP-dependent glyceraldehyde-3-phosphate dehydrogenase {ECO:0000313|EMBL:AES92547.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold006998945793278-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00131gapN EC:1.2.1.9 Carbon metabolism map01200
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000699s00025418.1PF00171.17Aldedh244831.80E-141


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.666
SRR1783600control2.467
SRR1783602moderate drought stress1.567
SRR1811619moderate drought stress1.654

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.315
DRR006520Root Summer glycyrrhizin high producing strain0.311
DRR006521Root Winter glycyrrhizin high producing strain3.462
DRR006522Root Winter glycyrrhizin high producing strain3.456
DRR006523Root Summer glycyrrhizin low producing strain0.922
DRR006524Root Summer glycyrrhizin low producing strain0.963
DRR006525Leaf Summer glycyrrhizin high producing strain92.824
DRR006526Leaf Summer glycyrrhizin high producing strain92.752

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)29.296
SRR2868004Drought Stress(Tissue:root)29.180
SRR2967015Control (Tissue:root)17.992

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave342.770
SRR9715740Leave601.504
SRR9715741Leave415.134
SRR9715739Root5.408
SRR9715742Root8.168
SRR9715743Root6.367

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.110
SRR8749028MeJA induced 9h0.027
SRR8749029MeJA induced 9h0.017
SRR8749030Uninduced0.282
SRR8749031Uninduced0.691
SRR8749032Uninduced0.438

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.769
SRR8400027Control-Root25.097

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved