Gene detail information of Glyur000700s00037060.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G51990.1 | 9.00E-37 | C-repeat-binding factor 4 |
| NR | AAV66464.1 | 1.68E-105 | drought responsive element binding protein [Glycine soja] |
| Swissprot | tr|Q9FJ93|DRE1D_ARATH | 2.00E-64 | Dehydration-responsive element-binding protein 1D |
| trEMBL | tr|Q5RM57|Q5RM57_GLYSO | 6.00E-106 | Drought responsive element binding protein {ECO:0000313|EMBL:AAV66464.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00700 | 86896 | 87606 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000700s00037060.1 | PF00847.15 | AP2 | 62 | 112 | 8.90E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.372 |
| SRR1783600 | control | 4.352 |
| SRR1783602 | moderate drought stress | 3.502 |
| SRR1811619 | moderate drought stress | 5.031 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.211 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.492 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 55.532 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 57.913 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.129 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.661 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.930 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.823 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.176 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.016 |
| SRR2967015 | Control (Tissue:root) | 0.977 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 20.133 |
| SRR9715740 | Leave | 3.193 |
| SRR9715741 | Leave | 10.664 |
| SRR9715739 | Root | 36.038 |
| SRR9715742 | Root | 46.847 |
| SRR9715743 | Root | 42.268 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.209 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.078 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.279 |
| SRR8400027 | Control-Root | 0.972 |