Gene detail information of Glyur000701s00019646.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G18000.1 | 0 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | XP_003619836.1 | 0 | Phosphoethanolamine N-methyltransferase [Medicago truncatula] |
| COG | YP_007206765.1 | 2.00E-54 | methyltransferase family protein [Singulisphaera acidiphila DSM 18658] |
| Swissprot | tr|Q9FR44|PEAM1_ARATH | 0 | Phosphoethanolamine N-methyltransferase 1 |
| trEMBL | tr|G7KPT7|G7KPT7_MEDTR | 0 | Phosphoethanolamine N-methyltransferase {ECO:0000313|EMBL:AES76054.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00701 | 28636 | 34736 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K05929 | E2.1.1.103, NMT | EC:2.1.1.103 | Glycerophospholipid metabolism | map00564 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000701s00019646.1 | PF08241.7 | Methyltransf_11 | 70 | 159 | 9.10E-09 |
| Glyur000701s00019646.1 | PF13489.1 | Methyltransf_23 | 238 | 392 | 8.80E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.429 |
| SRR1783600 | control | 1.465 |
| SRR1783602 | moderate drought stress | 0.435 |
| SRR1811619 | moderate drought stress | 0.477 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.661 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.717 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.428 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.800 |
| SRR2967015 | Control (Tissue:root) | 2.261 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.554 |
| SRR9715740 | Leave | 0.374 |
| SRR9715741 | Leave | 0.428 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 5.164 |
| SRR9715743 | Root | 3.158 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.051 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.147 |
| SRR8749032 | Uninduced | 0.069 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 13.263 |
| SRR8400027 | Control-Root | 41.726 |