Gene detail information of Glyur000701s00019649.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G17940.11.00E-138Galactose mutarotase-like superfamily protein
NRAFK40570.10unknown [Lotus japonicus]
COGYP_008148073.17.00E-101aldose 1-epimerase [Sorangium cellulosum So0157-2]
trEMBLtr|I3SJX8|I3SJX8_LOTJA0Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007014165644227-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01785galM, GALM EC:5.1.3.3 Glycolysis / Gluconeogenesis map00010
Galactose metabolismmap00052


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process

GO:0019318  hexose metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0016853  isomerase activity

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000701s00019649.1PF01263.15Aldose_epim113345.90E-94


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control93.346
SRR1783600control93.325
SRR1783602moderate drought stress88.702
SRR1811619moderate drought stress88.132

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain61.830
DRR006520Root Summer glycyrrhizin high producing strain59.876
DRR006521Root Winter glycyrrhizin high producing strain15.309
DRR006522Root Winter glycyrrhizin high producing strain15.219
DRR006523Root Summer glycyrrhizin low producing strain90.250
DRR006524Root Summer glycyrrhizin low producing strain89.135
DRR006525Leaf Summer glycyrrhizin high producing strain28.377
DRR006526Leaf Summer glycyrrhizin high producing strain27.860

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)51.222
SRR2868004Drought Stress(Tissue:root)47.174
SRR2967015Control (Tissue:root)43.055

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave26.025
SRR9715740Leave16.445
SRR9715741Leave20.985
SRR9715739Root50.853
SRR9715742Root47.112
SRR9715743Root49.568

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h45.894
SRR8749028MeJA induced 9h42.412
SRR8749029MeJA induced 9h47.985
SRR8749030Uninduced22.333
SRR8749031Uninduced11.506
SRR8749032Uninduced23.310

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root54.681
SRR8400027Control-Root62.697