Gene detail information of Glyur000702s00024638.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G47730.12.00E-44glutathione S-transferase phi 8
NRXP_004499313.11.52E-119PREDICTED: glutathione S-transferase F8, chloroplastic-like [Cicer arietinum]
COGYP_008152065.12.00E-31glutathione S-transferase [Sorangium cellulosum So0157-2]
Swissprottr|Q96266|GSTF8_ARATH1.00E-53Glutathione S-transferase F8, chloroplastic (Precursor)
trEMBLtr|B7FIJ1|B7FIJ1_MEDTR5.00E-118Uncharacterized protein {ECO:0000313|EMBL:AFK34603.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007024091742147+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00799GST, gst EC:2.5.1.18 Glutathione metabolism map00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Chemical carcinogenesismap05204
Fluid shear stress and atherosclerosismap05418
Platinum drug resistancemap01524


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000702s00024638.1PF02798.15GST_N33571.90E-06
Glyur000702s00024638.1PF00043.20GST_C981917.10E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control42.004
SRR1783600control42.702
SRR1783602moderate drought stress58.213
SRR1811619moderate drought stress57.028

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain56.087
DRR006520Root Summer glycyrrhizin high producing strain54.131
DRR006521Root Winter glycyrrhizin high producing strain10.204
DRR006522Root Winter glycyrrhizin high producing strain9.542
DRR006523Root Summer glycyrrhizin low producing strain68.050
DRR006524Root Summer glycyrrhizin low producing strain68.348
DRR006525Leaf Summer glycyrrhizin high producing strain155.168
DRR006526Leaf Summer glycyrrhizin high producing strain157.743

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)44.910
SRR2868004Drought Stress(Tissue:root)41.783
SRR2967015Control (Tissue:root)38.461

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave138.740
SRR9715740Leave122.729
SRR9715741Leave81.664
SRR9715739Root61.234
SRR9715742Root69.308
SRR9715743Root65.432

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.773
SRR8749028MeJA induced 9h9.159
SRR8749029MeJA induced 9h9.733
SRR8749030Uninduced2.846
SRR8749031Uninduced1.528
SRR8749032Uninduced4.596

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root114.434
SRR8400027Control-Root116.302

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved