Gene detail information of Glyur000702s00024652.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G39330.11.00E-116cinnamyl alcohol dehydrogenase 9
NRNP_001242314.10uncharacterized protein LOC100820588 [Glycine max]
COGYP_003799841.11.00E-125alcohol dehydrogenase [Candidatus Nitrospira defluvii]
Swissprottr|Q7XWU3|CADH6_ORYSJ0Probable cinnamyl alcohol dehydrogenase 6
trEMBLtr|C6TGK4|C6TGK4_SOYBN0Putative uncharacterized protein {ECO:0000313|EMBL:ACU20956.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00702119349124812-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00083E1.1.1.195 EC:1.1.1.195 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008270  zinc ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000702s00024652.1PF08240.7ADH_N381519.60E-28
Glyur000702s00024652.1PF00107.21ADH_zinc_N1953151.10E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.609
SRR1783600control0.609
SRR1783602moderate drought stress0.713
SRR1811619moderate drought stress0.703

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.376
DRR006520Root Summer glycyrrhizin high producing strain0.372
DRR006521Root Winter glycyrrhizin high producing strain0.997
DRR006522Root Winter glycyrrhizin high producing strain0.832
DRR006523Root Summer glycyrrhizin low producing strain0.537
DRR006524Root Summer glycyrrhizin low producing strain0.537
DRR006525Leaf Summer glycyrrhizin high producing strain61.778
DRR006526Leaf Summer glycyrrhizin high producing strain61.518

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)48.013
SRR2868004Drought Stress(Tissue:root)74.053
SRR2967015Control (Tissue:root)62.256

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave103.376
SRR9715740Leave94.586
SRR9715741Leave93.028
SRR9715739Root0.743
SRR9715742Root2.127
SRR9715743Root2.281

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.874
SRR8749028MeJA induced 9h0.461
SRR8749029MeJA induced 9h1.380
SRR8749030Uninduced12.615
SRR8749031Uninduced1.725
SRR8749032Uninduced6.335

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.126
SRR8400027Control-Root2.197

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved