Gene detail information of Glyur000703s00022096.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G30270.10CBL-interacting protein kinase 23
NRXP_010052037.10PREDICTED: CBL-interacting serine/threonine-protein kinase 23 [Eucalyptus grandis]
COGYP_002432751.12.00E-36serine/threonine protein kinase [Desulfatibacillum alkenivorans AK-01]
Swissprottr|Q93VD3|CIPKN_ARATH0CBL-interacting serine/threonine-protein kinase 23
trEMBLtr|A0A059CCJ4|A0A059CCJ4_EUCGR0Uncharacterized protein {ECO:0000313|EMBL:KCW75891.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007034428949855+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0007165  signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000703s00022096.1PF00069.20Pkinase262815.70E-74
Glyur000703s00022096.1PF03822.9NAF3243842.10E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.009
SRR1783600control7.029
SRR1783602moderate drought stress4.627
SRR1811619moderate drought stress4.528

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.759
DRR006520Root Summer glycyrrhizin high producing strain10.832
DRR006521Root Winter glycyrrhizin high producing strain2.800
DRR006522Root Winter glycyrrhizin high producing strain2.786
DRR006523Root Summer glycyrrhizin low producing strain4.291
DRR006524Root Summer glycyrrhizin low producing strain4.284
DRR006525Leaf Summer glycyrrhizin high producing strain0.785
DRR006526Leaf Summer glycyrrhizin high producing strain0.780

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)35.916
SRR2868004Drought Stress(Tissue:root)73.686
SRR2967015Control (Tissue:root)79.355

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.323
SRR9715740Leave8.461
SRR9715741Leave4.618
SRR9715739Root3.606
SRR9715742Root8.249
SRR9715743Root6.919

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.952
SRR8749028MeJA induced 9h21.602
SRR8749029MeJA induced 9h18.155
SRR8749030Uninduced14.317
SRR8749031Uninduced8.082
SRR8749032Uninduced6.661

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root35.695
SRR8400027Control-Root37.774

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved