Gene detail information of Glyur000704s00022934.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G11490.1 | 5.00E-116 | cysteine-rich RLK (RECEPTOR-like protein kinase) 33 |
| NR | XP_004502136.1 | 0 | PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Cicer arietinum] |
| COG | YP_006915967.1 | 4.00E-28 | PASTA sensor-containing serine/threonine protein kinase [Simiduia agarivorans SA1 = DSM 21679] |
| Swissprot | tr|Q9LDN1|CRK33_ARATH | 2.00E-141 | Putative cysteine-rich receptor-like protein kinase 33 (Precursor) |
| trEMBL | tr|G7J6M8|G7J6M8_MEDTR | 0 | Cysteine-rich receptor-kinase-like protein {ECO:0000313|EMBL:AES71610.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00704 | 24723 | 27377 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.7.2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000704s00022934.1 | PF01657.12 | Stress-antifung | 6 | 94 | 1.90E-18 |
| Glyur000704s00022934.1 | PF01657.12 | Stress-antifung | 149 | 197 | 3.10E-10 |
| Glyur000704s00022934.1 | PF00069.20 | Pkinase | 234 | 497 | 2.40E-47 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.022 |
| SRR1783600 | control | 0.022 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.056 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.056 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.102 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.036 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.093 |
| SRR8749028 | MeJA induced 9h | 0.019 |
| SRR8749029 | MeJA induced 9h | 0.112 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.000 |
| SRR8400027 | Control-Root | 0.197 |