Gene detail information of Glyur000705s00027460.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G23750.10Leucine-rich repeat protein kinase family protein
NRXP_003601704.10Receptor-like kinase [Medicago truncatula]
COGYP_004775215.16.00E-28RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|P43298|TMK1_ARATH0Probable receptor protein kinase TMK1 (Precursor)
trEMBLtr|G7JAT8|G7JAT8_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:AES71955.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00705657510857+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000705s00027460.1PF08263.7LRRNT_230680.00023
Glyur000705s00027460.1PF13855.1LRR_8951523.50E-08
Glyur000705s00027460.1PF08263.7LRRNT_23363700.15
Glyur000705s00027460.1PF12799.2LRR_43984332.70E-07
Glyur000705s00027460.1PF00069.20Pkinase5918628.20E-49


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.192
SRR1783600control14.367
SRR1783602moderate drought stress11.550
SRR1811619moderate drought stress11.490

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain36.054
DRR006520Root Summer glycyrrhizin high producing strain35.384
DRR006521Root Winter glycyrrhizin high producing strain7.459
DRR006522Root Winter glycyrrhizin high producing strain7.325
DRR006523Root Summer glycyrrhizin low producing strain92.489
DRR006524Root Summer glycyrrhizin low producing strain92.639
DRR006525Leaf Summer glycyrrhizin high producing strain15.608
DRR006526Leaf Summer glycyrrhizin high producing strain15.437

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)43.745
SRR2868004Drought Stress(Tissue:root)44.435
SRR2967015Control (Tissue:root)45.512

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave47.053
SRR9715740Leave45.521
SRR9715741Leave41.561
SRR9715739Root52.073
SRR9715742Root109.325
SRR9715743Root100.525

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h70.069
SRR8749028MeJA induced 9h98.217
SRR8749029MeJA induced 9h79.498
SRR8749030Uninduced117.165
SRR8749031Uninduced44.615
SRR8749032Uninduced46.450

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root28.738
SRR8400027Control-Root53.880

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved