Gene detail information of Glyur000705s00027470.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G13990.1 | 3.00E-165 | Exostosin family protein |
| NR | XP_004502248.1 | 0 | PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Cicer arietinum] |
| Swissprot | tr|Q7XJ98|KATAM_ARATH | 9.00E-167 | Xyloglucan galactosyltransferase KATAMARI1 |
| trEMBL | tr|G7JAS7|G7JAS7_MEDTR | 0 | Xyloglucan galactosyltransferase KATAMARI-like protein {ECO:0000313|EMBL:AES71944.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00705 | 79180 | 80655 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT47 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000705s00027470.1 | PF03016.10 | Exostosin | 66 | 411 | 1.10E-76 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.974 |
| SRR1783600 | control | 6.341 |
| SRR1783602 | moderate drought stress | 3.625 |
| SRR1811619 | moderate drought stress | 3.495 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.824 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.847 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.123 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.074 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.551 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.675 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.141 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.557 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.074 |
| SRR2967015 | Control (Tissue:root) | 4.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.580 |
| SRR9715740 | Leave | 0.480 |
| SRR9715741 | Leave | 0.658 |
| SRR9715739 | Root | 1.459 |
| SRR9715742 | Root | 2.808 |
| SRR9715743 | Root | 1.573 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.753 |
| SRR8749028 | MeJA induced 9h | 0.463 |
| SRR8749029 | MeJA induced 9h | 0.180 |
| SRR8749030 | Uninduced | 0.219 |
| SRR8749031 | Uninduced | 0.104 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 7.206 |
| SRR8400027 | Control-Root | 8.882 |