Gene detail information of Glyur000706s00025002.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46680.2 | 5.00E-24 | homeobox 7 |
| NR | AES72572.2 | 3.25E-68 | homeobox associated leucine zipper protein [Medicago truncatula] |
| Swissprot | tr|P46897|ATHB7_ARATH | 1.00E-30 | Homeobox-leucine zipper protein ATHB-7 |
| trEMBL | tr|G7J874|G7J874_MEDTR | 1.00E-68 | Homeobox associated leucine zipper protein {ECO:0000313|EMBL:AES72572.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00706 | 9840 | 11639 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000706s00025002.1 | PF00046.24 | Homeobox | 35 | 88 | 5.30E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 45.717 |
| SRR1783600 | control | 46.014 |
| SRR1783602 | moderate drought stress | 75.092 |
| SRR1811619 | moderate drought stress | 76.383 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 90.117 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 88.993 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 96.092 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 94.745 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.608 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.275 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.517 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.344 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 13.790 |
| SRR2868004 | Drought Stress(Tissue:root) | 24.934 |
| SRR2967015 | Control (Tissue:root) | 26.295 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.325 |
| SRR9715740 | Leave | 11.943 |
| SRR9715741 | Leave | 14.001 |
| SRR9715739 | Root | 7.187 |
| SRR9715742 | Root | 32.293 |
| SRR9715743 | Root | 30.389 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.268 |
| SRR8749028 | MeJA induced 9h | 27.831 |
| SRR8749029 | MeJA induced 9h | 7.299 |
| SRR8749030 | Uninduced | 38.590 |
| SRR8749031 | Uninduced | 9.726 |
| SRR8749032 | Uninduced | 22.450 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 61.991 |
| SRR8400027 | Control-Root | 48.852 |