Gene detail information of Glyur000706s00025003.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G53580.13.00E-128NAD(P)-linked oxidoreductase superfamily protein
NRAES72571.20aldo/keto reductase family oxidoreductase [Medicago truncatula]
COGYP_007093627.16.00E-113aldo/keto reductase [Chroococcidiopsis thermalis PCC 7203]
Swissprottr|Q56Y42|PLR1_ARATH7.00E-170Pyridoxal reductase, chloroplastic (Precursor)
trEMBLtr|G7J873|G7J873_MEDTR0Aldo/keto reductase family oxidoreductase {ECO:0000313|EMBL:AES72571.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007061350519437+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05275E1.1.1.65 EC:1.1.1.65 Vitamin B6 metabolism map00750


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000706s00025003.1PF00248.16Aldo_ket_red342932.70E-47


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.344
SRR1783600control2.547
SRR1783602moderate drought stress3.757
SRR1811619moderate drought stress3.943

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.915
DRR006520Root Summer glycyrrhizin high producing strain6.271
DRR006521Root Winter glycyrrhizin high producing strain5.981
DRR006522Root Winter glycyrrhizin high producing strain6.137
DRR006523Root Summer glycyrrhizin low producing strain5.613
DRR006524Root Summer glycyrrhizin low producing strain4.941
DRR006525Leaf Summer glycyrrhizin high producing strain31.934
DRR006526Leaf Summer glycyrrhizin high producing strain30.502

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.765
SRR2868004Drought Stress(Tissue:root)4.792
SRR2967015Control (Tissue:root)5.298

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.610
SRR9715740Leave31.036
SRR9715741Leave16.892
SRR9715739Root1.299
SRR9715742Root0.755
SRR9715743Root1.574

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.091
SRR8749028MeJA induced 9h2.161
SRR8749029MeJA induced 9h0.255
SRR8749030Uninduced2.134
SRR8749031Uninduced1.130
SRR8749032Uninduced1.031

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.140
SRR8400027Control-Root5.838

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved