Gene detail information of Glyur000709s00024191.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G39400.11.00E-157Calcium/lipid-binding (CaLB) phosphatase
NRXP_003531839.10PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN-like [Glycine max]
trEMBLtr|K7L8K6|K7L8K6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G26330.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00709104499108224+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01110PTEN EC:3.1.3.16 3.1.3.48 3.1.3.67 Inositol phosphate metabolism map00562
FoxO signaling pathwaymap04068
Phosphatidylinositol signaling systemmap04070
Sphingolipid signaling pathwaymap04071
PI3K-Akt signaling pathwaymap04151
mTOR signaling pathwaymap04150
Autophagy - animalmap04140
p53 signaling pathwaymap04115
Focal adhesionmap04510
Longevity regulating pathway - wormmap04212
Pathways in cancermap05200
Central carbon metabolism in cancermap05230
MicroRNAs in cancermap05206
Gliomamap05214
Melanomamap05218
Prostate cancermap05215
Endometrial cancermap05213
Breast cancermap05224
Small cell lung cancermap05222
Insulin resistancemap04931
Hepatitis Bmap05161
EGFR tyrosine kinase inhibitor resistancemap01521


Gene Ontology

biological_process

GO:0006470  protein dephosphorylation

GO:0016311  dephosphorylation


molecular_function

GO:0004725  protein tyrosine phosphatase activity

GO:0005515  protein binding

GO:0008138  protein tyrosine/serine/threonine phosphatase activity

GO:0016791  phosphatase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000709s00024191.1PF00782.15DSPc1151911.80E-07
Glyur000709s00024191.1PF10409.4PTEN_C23083921.30E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.859
SRR1783600control0.882
SRR1783602moderate drought stress1.020
SRR1811619moderate drought stress1.101

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.527
DRR006520Root Summer glycyrrhizin high producing strain0.685
DRR006521Root Winter glycyrrhizin high producing strain1.428
DRR006522Root Winter glycyrrhizin high producing strain1.342
DRR006523Root Summer glycyrrhizin low producing strain1.414
DRR006524Root Summer glycyrrhizin low producing strain1.440
DRR006525Leaf Summer glycyrrhizin high producing strain0.965
DRR006526Leaf Summer glycyrrhizin high producing strain0.919

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.125
SRR2868004Drought Stress(Tissue:root)1.878
SRR2967015Control (Tissue:root)1.918

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.083
SRR9715740Leave0.504
SRR9715741Leave1.999
SRR9715739Root0.356
SRR9715742Root1.153
SRR9715743Root0.571

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.286
SRR8749028MeJA induced 9h0.799
SRR8749029MeJA induced 9h0.337
SRR8749030Uninduced1.191
SRR8749031Uninduced0.489
SRR8749032Uninduced0.489

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.591
SRR8400027Control-Root2.284

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved