Gene detail

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Gene detail information of Glyur000710s00027820.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G25900.1	1.00E-140	GA requiring 3
NR	XP_003543711.2	0	PREDICTED: ent-kaurene oxidase, chloroplastic [Glycine max]
COG	YP_003405264.1	4.00E-13	cytochrome P450 [Haloterrigena turkmenica DSM 5511]
Swissprot	tr\|Q93ZB2\|KO1_ARATH	0	Ent-kaurene oxidase, chloroplastic
trEMBL	tr\|I1M5Z9\|I1M5Z9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G44870.1}

Sequence

Transcript Sequence

>Glyur000710s00027820.1
ATGGACAACTTGAGAGCTATCCTTCATGCAGTTCAGGCACAACCCTTTGCCACCTCAGTTGTTCTGGGTGGTTTGTCTCTGCTCTTGTTACTCTTCCTCAGACTAACAAACAAACATTCTAAACTTCCCCCTGTACCNGCGGTTCCAGGGCTACCATTGATAGGGAATTTGCTACAATTGAAGGAGAAGAAACCTTACAAGACTTTGACACAGTTAGCTGAGAAATATGGACCCATTTATTCCATCAGAACGGGTGCTTTCACTNTCATTGTTCTCAACTCTGTGCAAGTTGCCAAGGAGGCNATGGTGACAAGATTTTCGTCCATTTCAACTAGGAAACTATCAAATGCACTGAAAATTCTGACTTTTGATAAGTGCATGGTTGCAACAAGNGACTACAATGAATTTCACAAGATGATCAAGAGACATATTCTTACAAACGTTCTTGGAGCCAATGCCCAGAAGCAACACCGTCGCCACAGAGAAGCCATGGTGGAAAACATTTCAAGGCAGTTGAATGAACATGTCATGGCCTCCCCTAATTCATCTGGTCTGGGAAGTGATGTAGAATCCATTTATGTGGAGGAGCTTGGGCTTACTTTGTCAAGAGAGGACATATATAAGATTCTAGTGCTTGACATGATGGAAGGTGCCCTTGAGGTGGATTGGAGAGATTTNTTCCCATACTTGAGATGGTTTCCAAATAAGAGTATTGAGATGAAGATTCAGAGAATGCACTTTCGTAGAAAAGTTGTGATGAAGGCTTTGATCAATGAGCAGAAGAAGCGAATAGCATCTGGAAAGGAAGCAAATTGCTATATTGACTACTTGTTATCCGAAGCAAAAGAACTGACAGAAGAACAAATTGCCATGTTGCTTTGGGAGACCATTATTGAGACATCAGATACTACATTAGACCGTCTTTATGAGGAGCTTCAAAATGTGTGTGGATATGAAAAGCTAACTGATGACAAATTATCTAAGCTACCATACTTGGGAGCTGTTTTCCATGAAACTCTAAGGAGGCATAATCCAGTTCCAGTGGTCCCGCTGAGATATATTGCAATAAACTTATATGGATGCAACATGGACAAGAACCAGTGGGAAAATCCTTACCAGTGGATGCCTGAAAGGTTCCTTGATGAGAAGTATGACCCTGTNGATTTGTACAAGACCATGGCCTTTGGAGCAGGGAAAAGGGTGTGTGCAGGGTCTCTTCAGGCAATGTTGATTGCTTCCACTGCAATTGGTAGATTGGTTCAAGAATTTGAGTGGAAGCTCAAAGAAGGGGAGGAGGAAGCAGTGGATGTGGACACTGTGGGTCTTACCACTCATAGGCTCCATCCACTGCATGTGAAACTCAAGCCAAGAAATATTCAAACAGTAGAGAAGACNGAGTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00710	9160	13621	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP701A3

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K04122	GA3, CYP701	EC:1.14.13.78	Diterpenoid biosynthesis	map00904

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function GO:0005506 iron ion binding GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000710s00027820.1	PF00067.17	p450	47	304	4.50E-19
Glyur000710s00027820.1	PF00067.17	p450	306	348	3.20E-07
Glyur000710s00027820.1	PF00067.17	p450	354	436	3.30E-19

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.041
SRR1811619	moderate drought stress	0.066

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.079
DRR006522	Root Winter glycyrrhizin high producing strain	0.077
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.059
SRR2868004	Drought Stress(Tissue:root)	0.024
SRR2967015	Control (Tissue:root)	0.015

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.026
SRR9715740	Leave	0.000
SRR9715741	Leave	0.000
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.001
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.018
SRR8400027	Control-Root	0.092