Gene detail

Home
Network
Tools
- Search
- Blast
- Motif
- GSEA
- Heatmap Analysis
- JBrowse
Gene family
KEGG
Download
Help

Gene detail information of Glyur000710s00027827.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G24130.1	0	Leucine-rich receptor-like protein kinase family protein
NR	XP_006595193.1	0	PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130-like isoform X1 [Glycine max]
COG	YP_004775215.1	6.00E-39	RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprot	tr\|Q9ZUI0\|Y2241_ARATH	0	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 (Precursor)
trEMBL	tr\|I1M5Z7\|I1M5Z7_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G44850.1}

Sequence

Transcript Sequence

>Glyur000710s00027827.1
ATGGTTTTCTTAGAAACANTGTTCTTCCTTCTAGTACTATTACTTGTACACCCAATTTCAACATTTGGTACTGGTCACCACCACAGCCACCCTTCTCATTCTTTGCAAACAGATAAAGCCTCTCTTTTGGAGTTCAAGAAAACAATCATAAGAGACCCAAATTCCTCACTTGCTAACTGGGATGAATCTGTTCATGTTTGCAACTTCACAGGTGTTGAGTGTGATGAATTCCATCACCGTGTCATATATCTAATCCTGCATGACAACTATCTCTTTGGTCCNCTTTCACCTATCCTTTCCAATCTCACAGGACTCCATGTCCTTGAGATTGTTAACAGTCACTTGTTTGGCATTATTCCACCTGAGTTATCCTCCCTCAAACGCCTCCACCATATCCTTATTGAAGGGAACAACTTGCANGGTTCAATTCCTGAGTCTTTTTCCCTGCTTTCCAACCTTAGGCTTCTACATATCAAAGAGAGTAACATAACAGGTTCACTTCCTCCATCNCTCTTTTCTAATTGCACTCTACTTGACAATGTGGACCTTTCTGGAAACTCCTTAAGTGGTAAAATCCCAGAAGAGATTGGAAACTGTAAAGCCATGTGGAGTCTTACTTTATATANCAATCAGTTCACTGGACAACTTCCCTTTTCTTTGACCAATCTATCAATTCAAAACATAGATGTTGAGAACAATTATTTTTCAGGTGAATTGCCTAAAGAGTTAGTGAGTAGTTGGCCAAAACTTGTTTACCTTCAGTTATCATATAATAGCATGACAAGTCATGATAACAACACCAATCTTGATCCATTTTTCATTGCTCTTAGAAACAGCACTCATTTGAGGGAAATTGAATTGGGAGGCATGGACCTTGGGGGATGGTTTTCCAATACTGTGGTAAGCCAACTTGCCCCTAGTCTAAGAACTCTAATACTTCAGGAAAACCAAATATTTGGATCAATACCTCATTGCATAGCAAATCTTTCTAAGCTTTACATCCTCAATTTAACATCCAACCTTCTGAATGGAACAATCCCACCTGGGATTTGTAGTTTGCCATACTTGGAACAACTTTCCTTGTCACACAACCTGTTCAAGACTTCAATTCCAGAAGCTTTGGGCAATTGCCCTCGTCTCGGTTTGCTAGATCTTTCTCACAATGAATTCTCAGGTAGGATTCCAGAAAGTCTGGGGAATTTGGCTGAACTAGATTATTTGTTTCTCAACAATAACCTTCTCTCAGGAACAATACCTTCTACCATATTTGGACACTGCAAAAATCTGAACAAGCTTGACTTGTCCCATAATAGATTGACAGGAAGCATCCCACAGGACCTCTCAGGCCTACATGAAATCAGAATTTTCATAAATCTCTCACACAATCACCTTGAAGGCCCTCTTCCAATTGAGCTCAGCAAACTAGAAAAGGTTGAGGAGATAGACCTTTCATCAAATTACCTCAATGGAAGTATCTTCCCTCAGATAGCAAGCTGCTTTGCTGTTTCAATGATAAATTTTTCCAACAATCTTCTNCAAGGTGAGCTACCAGAATACTTGGGTGATCTGAAGAATCTCCAATCCTTTGATGTTTCAAGGAATCAATTATCTGGATTGATACCAGCAACACTTGGTAAAGTTGACACACTCACTTTCCTTAATTTGTCATTTAACAACCTGGAAGGAAGGATTCCTTTTGGTGGCATCTTTGATTCAATGTCAAGTTTGTCTTTCTTAGGAAACCCGCGTTTGTGTGGGAACATTACAGGCATGATTTTGTGCTCTCAAAGGAGACAATGGTTTCACACTCGCCTATTTTTTATTGTGTTAATTCTAGTAATCTTCATATCAACTTTTTTGTCAACAATTTGTTGTTTCATTGGATGCAAGAGACTTAAAGAAATCATCTCCTCACATGAGACTAAGGCTGGTAAGAAANAAGTTAGACCCGAATTGATATCTAACTTCCCAAGAATCACCTATAAGGAGTTATCAGATGCCACAGAAGGATTTGACATTCAGAGACTAGTTGGATCAGGTAGATTTGGAAATGTCTACAAGGGAATTCTTCTAGATGGGACACCAATAGCAGTCAAGGTACTGCAATTGCAATCTGGGAATTCCGCCAAAACCTTTAACCGCGAATGCCAAGTTTTAAAGAGAATTAGGCATAGGAATCTTATAAGGATCATCACAGCATGCAGTCTACCTGATTTTAAGGCTCTAGTTCTACCTTATATGGCCAATGGGAGCTTGGAGAGTTGTCTTTATCCTTCTTTAGGATCACCAAACTTGAGTATCATCCAAAGGGTGAATATTTGCAGTGACATAGCTGAAGGGATGGCCTATTTGCATCACCATTCCCCGGTCAGAGTTATACACTGTGATCTAAAACCAAGCAATGTTCTTCTCAATGATAACATGACAGCTCTAGTTTCTGATTTTGGGATTGCAAGGTTAATTATGAGTATTGGAGAAGGAAACAGTGGGGTTGTTACNAACATGGGGACCTCTACTGCAAATTCATTGTGTGGATCCATTGGATACATTGCACCAGAATATGGATTTGGATCAAAACCATCCACAAAAGGAGATGTCTATAGCTTTGGAGTTCTAGTTCTTGAGATGGTNACTAGAAAAAGACCAANAGATGACATGTTTGTTGGTGGACTAAGTCTACACAAATGGGCAAAGAGTCATTATCATGGAAGCATAGAAGAAATGTTAGACCCTACTTTGGTGATAGCTACAAGAGATCAATCCAAGGAGGTAAAGAAGATGTGGGAAATTGTAATTGGAGAGTTAATTGAGCTTGGAATCTTGTGCACACAAGAGTCACCTTCTACAAGGCCTACCATGCTTGATGCAGCAGATGACTTGGATCGTCTCAAGAGATACCTCACTGAGGACTCATAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00710	54658	58236	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.12.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005515 protein binding GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000710s00027827.1	PF08263.7	LRRNT_2	36	75	1.40E-09
Glyur000710s00027827.1	PF00560.28	LRR_1	383	401	0.98
Glyur000710s00027827.1	PF13855.1	LRR_8	403	464	5.90E-08
Glyur000710s00027827.1	PF13516.1	LRR_6	523	545	0.38
Glyur000710s00027827.1	PF00560.28	LRR_1	550	567	1
Glyur000710s00027827.1	PF00069.20	Pkinase	672	953	1.50E-42

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.013
SRR1783600	control	0.013
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	1.135
SRR2868004	Drought Stress(Tissue:root)	1.041
SRR2967015	Control (Tissue:root)	0.865

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.000
SRR9715740	Leave	0.000
SRR9715741	Leave	0.000
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.074
SRR8400027	Control-Root	0.056