Gene detail information of Glyur000710s00027832.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G48930.10hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
NRXP_004507045.10PREDICTED: shikimate O-hydroxycinnamoyltransferase-like isoform X1 [Cicer arietinum]
Swissprottr|Q8GSM7|HST_TOBAC0Shikimate O-hydroxycinnamoyltransferase
trEMBLtr|A4F1S3|A4F1S3_CLITE0Putative acyltransferase {ECO:0000313|EMBL:BAF49306.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007108324087573-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13065E2.3.1.133, HCT EC:2.3.1.133 Phenylpropanoid biosynthesis map00940
Stilbenoid, diarylheptanoid and gingerol biosynthesismap00945
Flavonoid biosynthesismap00941


Gene Ontology

molecular_function

GO:0016747  transferase activity, transferring acyl groups other than amino-acyl groups



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000710s00027832.1PF02458.10Transferase34333.00E-114


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control38.388
SRR1783600control38.486
SRR1783602moderate drought stress40.953
SRR1811619moderate drought stress40.787

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.912
DRR006520Root Summer glycyrrhizin high producing strain26.206
DRR006521Root Winter glycyrrhizin high producing strain2.872
DRR006522Root Winter glycyrrhizin high producing strain2.912
DRR006523Root Summer glycyrrhizin low producing strain41.837
DRR006524Root Summer glycyrrhizin low producing strain41.313
DRR006525Leaf Summer glycyrrhizin high producing strain56.455
DRR006526Leaf Summer glycyrrhizin high producing strain56.366

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)188.025
SRR2868004Drought Stress(Tissue:root)290.108
SRR2967015Control (Tissue:root)149.800

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave399.025
SRR9715740Leave474.006
SRR9715741Leave631.160
SRR9715739Root93.384
SRR9715742Root140.246
SRR9715743Root121.952

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h182.504
SRR8749028MeJA induced 9h401.561
SRR8749029MeJA induced 9h208.352
SRR8749030Uninduced105.318
SRR8749031Uninduced41.602
SRR8749032Uninduced60.587

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root201.486
SRR8400027Control-Root120.002

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved