Gene detail information of Glyur000712s00032631.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G04120.13.00E-68glyceraldehyde-3-phosphate dehydrogenase C subunit 1
NRCAI83772.11.98E-85glyceraldehyde-3-phosphate-dehydrogenase [Lupinus albus]
COGYP_462743.11.00E-67glyceraldehyde 3-phosphate dehydrogenase [Syntrophus aciditrophicus SB]
Swissprottr|P34921|G3PC_DIACA1.00E-86Glyceraldehyde-3-phosphate dehydrogenase, cytosolic
trEMBLtr|Q53I52|Q53I52_LUPAL7.00E-86Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007129042291696-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00134GAPDH, gapA EC:1.2.1.12 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Carbon fixation in photosynthetic organismsmap00710
HIF-1 signaling pathwaymap04066
Alzheimer's diseasemap05010


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000712s00032631.1PF00044.19Gp_dh_N1230.00021
Glyur000712s00032631.1PF02800.15Gp_dh_C28866.40E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control152.553
SRR1783600control90.244
SRR1783602moderate drought stress80.908
SRR1811619moderate drought stress63.302

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain93.962
DRR006520Root Summer glycyrrhizin high producing strain189.255
DRR006521Root Winter glycyrrhizin high producing strain63.485
DRR006522Root Winter glycyrrhizin high producing strain103.190
DRR006523Root Summer glycyrrhizin low producing strain169.728
DRR006524Root Summer glycyrrhizin low producing strain104.439
DRR006525Leaf Summer glycyrrhizin high producing strain46.510
DRR006526Leaf Summer glycyrrhizin high producing strain33.137

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)59.733
SRR2868004Drought Stress(Tissue:root)41.531
SRR2967015Control (Tissue:root)36.769

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.464
SRR9715740Leave6.060
SRR9715741Leave7.302
SRR9715739Root40.875
SRR9715742Root19.998
SRR9715743Root38.110

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.848
SRR8749028MeJA induced 9h16.096
SRR8749029MeJA induced 9h8.172
SRR8749030Uninduced5.289
SRR8749031Uninduced0.787
SRR8749032Uninduced13.220

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.065
SRR8400027Control-Root16.865

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved