Gene detail information of Glyur000713s00015587.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G13000.10glucan synthase-like 12
NRXP_004497380.10PREDICTED: callose synthase 3-like [Cicer arietinum]
Swissprottr|Q9LXT9|CALS3_ARATH0Callose synthase 3
trEMBLtr|V7BDX1|V7BDX1_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW14641.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00713470743669-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT48


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006075  (1->3)-beta-D-glucan biosynthetic process


cellular_component

GO:0000148  1,3-beta-D-glucan synthase complex

GO:0016020  membrane


molecular_function

GO:0003843  1,3-beta-D-glucan synthase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000713s00015587.1PF04652.11DUF605441665.70E-09
Glyur000713s00015587.1PF14288.1FKS1_dom13163991.20E-19
Glyur000713s00015587.1PF02364.10Glucan_synthase101713504.50E-82
Glyur000713s00015587.1PF14288.1FKS1_dom1178718531.80E-08
Glyur000713s00015587.1PF02364.10Glucan_synthase244425597.40E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.847
SRR1783600control6.996
SRR1783602moderate drought stress5.938
SRR1811619moderate drought stress5.932

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.099
DRR006520Root Summer glycyrrhizin high producing strain6.233
DRR006521Root Winter glycyrrhizin high producing strain3.362
DRR006522Root Winter glycyrrhizin high producing strain3.241
DRR006523Root Summer glycyrrhizin low producing strain4.779
DRR006524Root Summer glycyrrhizin low producing strain4.701
DRR006525Leaf Summer glycyrrhizin high producing strain2.402
DRR006526Leaf Summer glycyrrhizin high producing strain2.289

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.694
SRR2868004Drought Stress(Tissue:root)24.962
SRR2967015Control (Tissue:root)25.704

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.213
SRR9715740Leave2.859
SRR9715741Leave3.758
SRR9715739Root1.731
SRR9715742Root15.617
SRR9715743Root13.049

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.581
SRR8749028MeJA induced 9h13.705
SRR8749029MeJA induced 9h2.877
SRR8749030Uninduced0.947
SRR8749031Uninduced2.392
SRR8749032Uninduced0.872

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root23.991
SRR8400027Control-Root26.445

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved