Gene detail information of Glyur000713s00015594.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G55030.11.00E-70phosphatidylglycerolphosphate synthase 2
NRXP_004497372.12.15E-120PREDICTED: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase-like [Cicer arietinum]
COGYP_004918718.13.00E-43CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Methylomicrobium alcaliphilum 20Z]
Swissprottr|Q9M2W3|PGPS2_ARATH8.00E-99CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2
trEMBLtr|G7IAX4|G7IAX4_MEDTR2.00E-115Phosphatidylglycerolphosphate synthase {ECO:0000313|EMBL:AES63060.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007138332186372+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00995pgsA, PGS1 EC:2.7.8.5 Glycerophospholipid metabolism map00564


Gene Ontology

biological_process

GO:0008654  phospholipid biosynthetic process


cellular_component

GO:0016020  membrane

GO:0016021  integral component of membrane


molecular_function

GO:0008444  CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity

GO:0016780  phosphotransferase activity, for other substituted phosphate groups

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000713s00015594.1PF01066.16CDP-OH_P_transf1061921.80E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.770
SRR1783600control21.370
SRR1783602moderate drought stress16.697
SRR1811619moderate drought stress15.471

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.239
DRR006520Root Summer glycyrrhizin high producing strain17.568
DRR006521Root Winter glycyrrhizin high producing strain11.177
DRR006522Root Winter glycyrrhizin high producing strain10.883
DRR006523Root Summer glycyrrhizin low producing strain10.724
DRR006524Root Summer glycyrrhizin low producing strain10.917
DRR006525Leaf Summer glycyrrhizin high producing strain19.216
DRR006526Leaf Summer glycyrrhizin high producing strain18.826

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.689
SRR2868004Drought Stress(Tissue:root)19.693
SRR2967015Control (Tissue:root)17.263

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.973
SRR9715740Leave14.687
SRR9715741Leave11.310
SRR9715739Root13.176
SRR9715742Root12.585
SRR9715743Root13.810

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h25.233
SRR8749028MeJA induced 9h17.179
SRR8749029MeJA induced 9h15.209
SRR8749030Uninduced5.709
SRR8749031Uninduced2.269
SRR8749032Uninduced3.362

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.439
SRR8400027Control-Root22.277

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved