Gene detail information of Glyur000713s00015601.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G13520.10peptidase M1 family protein
NRXP_004497366.10PREDICTED: leukotriene A-4 hydrolase-like [Cicer arietinum]
COGYP_633291.11.00E-157M1 family peptidase [Myxococcus xanthus DK 1622]
Swissprottr|Q9FY49|LKHA4_ARATH0Leukotriene A-4 hydrolase homolog
trEMBLtr|G7IAW9|G7IAW9_MEDTR0Leukotriene A-4 hydrolase-like protein {ECO:0000313|EMBL:AES63055.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00713110319115480+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01254LTA4H EC:3.3.2.6 Arachidonic acid metabolism map00590


Gene Ontology

biological_process

GO:0006508  proteolysis

GO:0019370  leukotriene biosynthetic process


molecular_function

GO:0005488  binding

GO:0008237  metallopeptidase activity

GO:0008270  zinc ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000713s00015601.1PF01433.15Peptidase_M1463103.60E-28
Glyur000713s00015601.1PF09127.6Leuk-A4-hydro_C4666041.20E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.418
SRR1783600control16.631
SRR1783602moderate drought stress17.197
SRR1811619moderate drought stress16.899

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain37.619
DRR006520Root Summer glycyrrhizin high producing strain37.333
DRR006521Root Winter glycyrrhizin high producing strain3.853
DRR006522Root Winter glycyrrhizin high producing strain3.441
DRR006523Root Summer glycyrrhizin low producing strain32.749
DRR006524Root Summer glycyrrhizin low producing strain32.641
DRR006525Leaf Summer glycyrrhizin high producing strain7.899
DRR006526Leaf Summer glycyrrhizin high producing strain8.053

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)61.415
SRR2868004Drought Stress(Tissue:root)34.125
SRR2967015Control (Tissue:root)36.327

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.755
SRR9715740Leave2.226
SRR9715741Leave2.403
SRR9715739Root16.125
SRR9715742Root15.036
SRR9715743Root16.151

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.442
SRR8749028MeJA induced 9h8.398
SRR8749029MeJA induced 9h6.691
SRR8749030Uninduced1.231
SRR8749031Uninduced0.252
SRR8749032Uninduced0.841

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root35.947
SRR8400027Control-Root33.999

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved