Gene detail information of Glyur000713s00015603.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G13670.10Protein kinase family protein
NRXP_003552750.10PREDICTED: serine/threonine-protein kinase VRK1-like [Glycine max]
COGYP_005321927.11.00E-13peptidase c14 caspase catalytic subunit p20 [Saprospira grandis str. Lewin]
Swissprottr|P42158|KC1D_ARATH8.00E-33Casein kinase I isoform delta-like
trEMBLtr|I1N5F2|I1N5F2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G53810.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00713117317123010-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:3.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000713s00015603.1PF00069.20Pkinase1202824.20E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control53.174
SRR1783600control53.691
SRR1783602moderate drought stress84.521
SRR1811619moderate drought stress84.062

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain97.062
DRR006520Root Summer glycyrrhizin high producing strain96.682
DRR006521Root Winter glycyrrhizin high producing strain91.187
DRR006522Root Winter glycyrrhizin high producing strain88.569
DRR006523Root Summer glycyrrhizin low producing strain98.399
DRR006524Root Summer glycyrrhizin low producing strain98.946
DRR006525Leaf Summer glycyrrhizin high producing strain31.398
DRR006526Leaf Summer glycyrrhizin high producing strain31.552

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)96.992
SRR2868004Drought Stress(Tissue:root)102.783
SRR2967015Control (Tissue:root)110.843

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave59.654
SRR9715740Leave58.430
SRR9715741Leave63.923
SRR9715739Root49.219
SRR9715742Root98.076
SRR9715743Root93.356

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h68.170
SRR8749028MeJA induced 9h72.274
SRR8749029MeJA induced 9h55.207
SRR8749030Uninduced49.141
SRR8749031Uninduced81.548
SRR8749032Uninduced76.029

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root92.987
SRR8400027Control-Root87.609

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved