Gene detail information of Glyur000714s00022857.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G01630.10O-Glycosyl hydrolases family 17 protein
NRXP_006580439.10PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Glycine max]
Swissprottr|Q9ZU91|E133_ARATH0Glucan endo-1,3-beta-glucosidase 3 (Precursor)
trEMBLtr|K7KRK1|K7KRK1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G34930.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007142967635064+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH17,CBM43


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K19891GN1_2_3 EC:3.2.1.39 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000714s00022857.1PF00332.13Glyco_hydro_17273463.30E-86
Glyur000714s00022857.1PF07983.8X83634331.50E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.889
SRR1783600control9.991
SRR1783602moderate drought stress9.998
SRR1811619moderate drought stress9.950

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.210
DRR006520Root Summer glycyrrhizin high producing strain7.040
DRR006521Root Winter glycyrrhizin high producing strain0.961
DRR006522Root Winter glycyrrhizin high producing strain0.870
DRR006523Root Summer glycyrrhizin low producing strain9.296
DRR006524Root Summer glycyrrhizin low producing strain9.168
DRR006525Leaf Summer glycyrrhizin high producing strain7.469
DRR006526Leaf Summer glycyrrhizin high producing strain7.563

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.986
SRR2868004Drought Stress(Tissue:root)11.508
SRR2967015Control (Tissue:root)12.038

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.830
SRR9715740Leave10.101
SRR9715741Leave11.091
SRR9715739Root5.392
SRR9715742Root8.126
SRR9715743Root6.066

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.824
SRR8749028MeJA induced 9h11.638
SRR8749029MeJA induced 9h7.226
SRR8749030Uninduced3.300
SRR8749031Uninduced1.874
SRR8749032Uninduced1.292

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.037
SRR8400027Control-Root11.533

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved