Gene detail information of Glyur000714s00022863.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G70710.10glycosyl hydrolase 9B1
NRXP_004503385.10PREDICTED: endoglucanase 8-like [Cicer arietinum]
COGYP_004908734.11.00E-83putative endoglucanase precursor [Kitasatospora setae KM-6054]
Swissprottr|Q9CAC1|GUN8_ARATH0Endoglucanase 8 (Precursor)
trEMBLtr|G7LAH3|G7LAH3_MEDTR0Endoglucanase {ECO:0000256|RuleBase:RU361166}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007146658278173-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH9


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000714s00022863.1PF00759.14Glyco_hydro_9304885.10E-158


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.563
SRR1783600control17.322
SRR1783602moderate drought stress16.892
SRR1811619moderate drought stress17.382

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain62.689
DRR006520Root Summer glycyrrhizin high producing strain62.685
DRR006521Root Winter glycyrrhizin high producing strain0.049
DRR006522Root Winter glycyrrhizin high producing strain0.048
DRR006523Root Summer glycyrrhizin low producing strain17.674
DRR006524Root Summer glycyrrhizin low producing strain19.201
DRR006525Leaf Summer glycyrrhizin high producing strain1.029
DRR006526Leaf Summer glycyrrhizin high producing strain1.117

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)57.976
SRR2868004Drought Stress(Tissue:root)30.975
SRR2967015Control (Tissue:root)48.091

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.826
SRR9715740Leave0.028
SRR9715741Leave1.798
SRR9715739Root22.050
SRR9715742Root8.738
SRR9715743Root10.667

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.527
SRR8749028MeJA induced 9h0.695
SRR8749029MeJA induced 9h6.775
SRR8749030Uninduced0.314
SRR8749031Uninduced0.213
SRR8749032Uninduced0.694

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root76.144
SRR8400027Control-Root74.252

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved