Gene detail information of Glyur000715s00031143.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G26670.12.00E-83Plant haem oxygenase (decyclizing) family protein
NRXP_004514862.15.78E-134PREDICTED: heme oxygenase 1, chloroplastic-like isoform X1 [Cicer arietinum]
Swissprottr|O48782|HMOX1_ARATH2.00E-119Heme oxygenase 1, chloroplastic (Precursor)
trEMBLtr|Q93VB1|Q93VB1_PEA2.00E-132Putative heme oxygenase 1 {ECO:0000313|EMBL:AAK82969.1} (Precursor)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007152827731906-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00510HMOX, hmuO, ho EC:1.14.14.18 Porphyrin and chlorophyll metabolism map00860
Mineral absorptionmap04978
Fluid shear stress and atherosclerosismap05418


Gene Ontology

biological_process

GO:0006788  heme oxidation

GO:0055114  oxidation-reduction process


molecular_function

GO:0004392  heme oxygenase (decyclizing) activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000715s00031143.1PF01126.15Heme_oxygenase612211.20E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.040
SRR1783600control0.041
SRR1783602moderate drought stress0.036
SRR1811619moderate drought stress0.042

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.249
DRR006522Root Winter glycyrrhizin high producing strain0.243
DRR006523Root Summer glycyrrhizin low producing strain2.784
DRR006524Root Summer glycyrrhizin low producing strain2.470
DRR006525Leaf Summer glycyrrhizin high producing strain0.000
DRR006526Leaf Summer glycyrrhizin high producing strain0.000

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.293
SRR2868004Drought Stress(Tissue:root)0.106
SRR2967015Control (Tissue:root)0.608

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.000
SRR9715740Leave0.000
SRR9715741Leave0.000
SRR9715739Root0.158
SRR9715742Root0.000
SRR9715743Root0.000

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.367
SRR8749028MeJA induced 9h1.220
SRR8749029MeJA induced 9h0.526
SRR8749030Uninduced0.783
SRR8749031Uninduced1.743
SRR8749032Uninduced3.626

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.908
SRR8400027Control-Root2.280