Gene detail information of Glyur000717s00025332.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G18700.10CBL-interacting protein kinase 12
NRXP_007159452.10hypothetical protein PHAVU_002G238800g [Phaseolus vulgaris]
COGYP_007468874.19.00E-36serine/threonine protein kinase [Desulfocapsa sulfexigens DSM 10523]
Swissprottr|Q9SN43|CIPKC_ARATH0CBL-interacting serine/threonine-protein kinase 12
trEMBLtr|V7CR81|V7CR81_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW31446.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007177737978929+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0007165  signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000717s00025332.1PF00069.20Pkinase382929.50E-76
Glyur000717s00025332.1PF03822.9NAF3554122.20E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control173.115
SRR1783600control174.022
SRR1783602moderate drought stress337.470
SRR1811619moderate drought stress334.188

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain234.553
DRR006520Root Summer glycyrrhizin high producing strain233.542
DRR006521Root Winter glycyrrhizin high producing strain137.500
DRR006522Root Winter glycyrrhizin high producing strain134.322
DRR006523Root Summer glycyrrhizin low producing strain169.315
DRR006524Root Summer glycyrrhizin low producing strain167.932
DRR006525Leaf Summer glycyrrhizin high producing strain36.077
DRR006526Leaf Summer glycyrrhizin high producing strain36.189

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)151.795
SRR2868004Drought Stress(Tissue:root)178.874
SRR2967015Control (Tissue:root)186.955

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave71.095
SRR9715740Leave112.222
SRR9715741Leave100.036
SRR9715739Root150.429
SRR9715742Root158.539
SRR9715743Root150.087

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.131
SRR8749028MeJA induced 9h27.169
SRR8749029MeJA induced 9h14.170
SRR8749030Uninduced10.196
SRR8749031Uninduced5.848
SRR8749032Uninduced8.883

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root141.611
SRR8400027Control-Root125.331

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved