Gene detail information of Glyur000717s00025333.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G45840.23.00E-166Leucine-rich repeat protein kinase family protein
NRXP_004504296.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1-like [Cicer arietinum]
COGYP_001192956.18.00E-12two component regulator [Flavobacterium johnsoniae UW101]
Swissprottr|C0LGU7|Y5458_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At5g45840 (Precursor)
trEMBLtr|G7LJE3|G7LJE3_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:AET04248.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007178305389186-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.15.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000717s00025333.1PF08263.7LRRNT_230703.60E-13
Glyur000717s00025333.1PF00560.28LRR_11221420.1
Glyur000717s00025333.1PF07714.12Pkinase_Tyr4236732.30E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.025
SRR1783600control9.129
SRR1783602moderate drought stress5.181
SRR1811619moderate drought stress5.361

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.270
DRR006520Root Summer glycyrrhizin high producing strain6.171
DRR006521Root Winter glycyrrhizin high producing strain1.616
DRR006522Root Winter glycyrrhizin high producing strain1.557
DRR006523Root Summer glycyrrhizin low producing strain5.035
DRR006524Root Summer glycyrrhizin low producing strain5.054
DRR006525Leaf Summer glycyrrhizin high producing strain1.362
DRR006526Leaf Summer glycyrrhizin high producing strain1.389

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.360
SRR2868004Drought Stress(Tissue:root)8.642
SRR2967015Control (Tissue:root)5.990

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.177
SRR9715740Leave0.566
SRR9715741Leave0.963
SRR9715739Root1.951
SRR9715742Root3.070
SRR9715743Root2.618

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h24.962
SRR8749028MeJA induced 9h19.669
SRR8749029MeJA induced 9h27.464
SRR8749030Uninduced7.052
SRR8749031Uninduced13.142
SRR8749032Uninduced6.646

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.278
SRR8400027Control-Root14.428

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved