Gene detail information of Glyur000717s00025338.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G45800.13.00E-125Leucine-rich repeat protein kinase family protein
NRXP_007159459.10hypothetical protein PHAVU_002G239400g [Phaseolus vulgaris]
COGYP_004163702.16.00E-16hypothetical protein [Cellulophaga algicola DSM 14237]
Swissprottr|C0LGK9|Y2242_ARATH2.00E-97Probable LRR receptor-like serine/threonine-protein kinase At2g24230 (Precursor)
trEMBLtr|V7CQ11|V7CQ11_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW31453.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00717115956119135+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000717s00025338.1PF13855.1LRR_8551156.30E-08
Glyur000717s00025338.1PF13855.1LRR_81341881.70E-08
Glyur000717s00025338.1PF00560.28LRR_12022220.027
Glyur000717s00025338.1PF07714.12Pkinase_Tyr3985654.70E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.446
SRR1783600control0.450
SRR1783602moderate drought stress0.489
SRR1811619moderate drought stress0.486

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.548
DRR006520Root Summer glycyrrhizin high producing strain0.422
DRR006521Root Winter glycyrrhizin high producing strain0.260
DRR006522Root Winter glycyrrhizin high producing strain0.254
DRR006523Root Summer glycyrrhizin low producing strain0.427
DRR006524Root Summer glycyrrhizin low producing strain0.430
DRR006525Leaf Summer glycyrrhizin high producing strain11.623
DRR006526Leaf Summer glycyrrhizin high producing strain11.309

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.353
SRR2868004Drought Stress(Tissue:root)9.250
SRR2967015Control (Tissue:root)6.369

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.468
SRR9715740Leave17.353
SRR9715741Leave18.792
SRR9715739Root0.729
SRR9715742Root2.036
SRR9715743Root1.405

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.707
SRR8749028MeJA induced 9h0.325
SRR8749029MeJA induced 9h0.352
SRR8749030Uninduced0.075
SRR8749031Uninduced0.099
SRR8749032Uninduced0.266

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.605
SRR8400027Control-Root2.194

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved