Gene detail information of Glyur000718s00020287.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G13730.11.00E-143cytochrome P450, family 90, subfamily D, polypeptide 1
NRXP_003531621.10PREDICTED: 3-epi-6-deoxocathasterone 23-monooxygenase isoform X1 [Glycine max]
COGYP_007055574.12.00E-40cytochrome P450 [Rivularia sp. PCC 7116]
Swissprottr|Q94IA6|C90D1_ARATH3.00E-1783-epi-6-deoxocathasterone 23-monooxygenase
trEMBLtr|V7APG7|V7APG7_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW07552.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00718107372111761+


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP90D1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K12638CYP90D1 EC:1.14.13.112 Brassinosteroid biosynthesis map00905


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000718s00020287.1PF00067.17p450424134.50E-32


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.157
SRR1783600control0.043
SRR1783602moderate drought stress0.207
SRR1811619moderate drought stress0.230

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.226
DRR006520Root Summer glycyrrhizin high producing strain0.154
DRR006521Root Winter glycyrrhizin high producing strain0.085
DRR006522Root Winter glycyrrhizin high producing strain0.083
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain0.214
DRR006526Leaf Summer glycyrrhizin high producing strain0.174

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.498
SRR2868004Drought Stress(Tissue:root)4.994
SRR2967015Control (Tissue:root)4.994

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.327
SRR9715740Leave0.049
SRR9715741Leave0.042
SRR9715739Root0.000
SRR9715742Root2.208
SRR9715743Root1.888

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.475
SRR8749028MeJA induced 9h1.788
SRR8749029MeJA induced 9h3.047
SRR8749030Uninduced0.098
SRR8749031Uninduced0.054
SRR8749032Uninduced0.073

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.422
SRR8400027Control-Root2.336

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved