Gene detail information of Glyur000719s00020082.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G37830.10oxoprolinase 1
NRXP_004504835.10PREDICTED: LOW QUALITY PROTEIN: 5-oxoprolinase-like [Cicer arietinum]
COGYP_007467122.10N-methylhydantoinase B/acetone carboxylase, alpha subunit [Desulfocapsa sulfexigens DSM 10523]
Swissprottr|Q9FIZ7|OPLA_ARATH05-oxoprolinase
trEMBLtr|G7JV66|G7JV66_MEDTR05-oxoprolinase {ECO:0000313|EMBL:AES90614.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0071921655962+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01469OPLAH, OXP1, oplAH EC:3.5.2.9 Glutathione metabolism map00480


Gene Ontology

molecular_function

GO:0003824  catalytic activity

GO:0016787  hydrolase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000719s00020082.1PF05378.8Hydant_A_N102171.30E-58
Glyur000719s00020082.1PF01968.13Hydantoinase_A2385371.40E-97
Glyur000719s00020082.1PF02538.9Hydantoinase_B73912622.30E-190


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.466
SRR1783600control10.516
SRR1783602moderate drought stress18.620
SRR1811619moderate drought stress18.882

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.818
DRR006520Root Summer glycyrrhizin high producing strain16.492
DRR006521Root Winter glycyrrhizin high producing strain10.704
DRR006522Root Winter glycyrrhizin high producing strain10.275
DRR006523Root Summer glycyrrhizin low producing strain12.426
DRR006524Root Summer glycyrrhizin low producing strain12.602
DRR006525Leaf Summer glycyrrhizin high producing strain7.339
DRR006526Leaf Summer glycyrrhizin high producing strain7.273

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.614
SRR2868004Drought Stress(Tissue:root)18.382
SRR2967015Control (Tissue:root)16.657

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.404
SRR9715740Leave8.736
SRR9715741Leave7.117
SRR9715739Root2.777
SRR9715742Root12.118
SRR9715743Root10.369

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.684
SRR8749028MeJA induced 9h9.230
SRR8749029MeJA induced 9h8.142
SRR8749030Uninduced8.882
SRR8749031Uninduced7.422
SRR8749032Uninduced6.741

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.871
SRR8400027Control-Root12.358

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved