Gene detail information of Glyur000719s00020097.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G60600.24.00E-70UbiA prenyltransferase family protein
NRXP_003543928.11.08E-109PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic-like [Glycine max]
COGYP_007132869.12.00E-411,4-dihydroxy-2-naphthoate phytyltransferase [Stanieria cyanosphaera PCC 7437]
Swissprottr|Q0WUA3|MENA_ARATH9.00E-851,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic (Precursor)
trEMBLtr|I1LX60|I1LX60_SOYBN3.00E-110Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G08010.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007195863962048-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K02548menA EC:2.5.1.74 2.5.1.- Ubiquinone and other terpenoid-quinone biosynthesis map00130


Gene Ontology

biological_process

GO:0042372  phylloquinone biosynthetic process


cellular_component

GO:0016021  integral component of membrane


molecular_function

GO:0004659  prenyltransferase activity

GO:0016740  transferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000719s00020097.2PF01040.13UbiA813151.30E-24


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.000
SRR1783600control0.000
SRR1783602moderate drought stress0.000
SRR1811619moderate drought stress0.000

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.166
DRR006520Root Summer glycyrrhizin high producing strain0.205
DRR006521Root Winter glycyrrhizin high producing strain0.193
DRR006522Root Winter glycyrrhizin high producing strain0.189
DRR006523Root Summer glycyrrhizin low producing strain0.032
DRR006524Root Summer glycyrrhizin low producing strain0.027
DRR006525Leaf Summer glycyrrhizin high producing strain29.942
DRR006526Leaf Summer glycyrrhizin high producing strain27.995

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.198
SRR2868004Drought Stress(Tissue:root)2.409
SRR2967015Control (Tissue:root)0.425

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave47.640
SRR9715740Leave62.798
SRR9715741Leave41.727
SRR9715739Root0.015
SRR9715742Root0.154
SRR9715743Root0.174

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.517
SRR8749028MeJA induced 9h1.933
SRR8749029MeJA induced 9h0.896
SRR8749030Uninduced4.864
SRR8749031Uninduced1.317
SRR8749032Uninduced3.561

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.361
SRR8400027Control-Root0.986

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved