Gene detail information of Glyur000720s00020695.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G62040.13.00E-97Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
NRXP_004495846.18.33E-169PREDICTED: uncharacterized protein C24B11.05-like isoform X6 [Cicer arietinum]
COGYP_004173930.14.00E-22pyrimidine 5-nucleotidase family protein [Anaerolinea thermophila UNI-1]
trEMBLtr|C6TKD8|C6TKD8_SOYBN2.00E-166Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G27980.10}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007206542169047-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K18551SDT1 EC:3.1.3.- Nicotinate and nicotinamide metabolism map00760


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016787  hydrolase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000720s00020695.2PF13419.1HAD_2371682.00E-08
Glyur000720s00020695.2PF13419.1HAD_22112552.50E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.111
SRR1783600control5.562
SRR1783602moderate drought stress3.915
SRR1811619moderate drought stress3.901

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.646
DRR006520Root Summer glycyrrhizin high producing strain10.233
DRR006521Root Winter glycyrrhizin high producing strain163.436
DRR006522Root Winter glycyrrhizin high producing strain154.980
DRR006523Root Summer glycyrrhizin low producing strain23.823
DRR006524Root Summer glycyrrhizin low producing strain23.245
DRR006525Leaf Summer glycyrrhizin high producing strain42.712
DRR006526Leaf Summer glycyrrhizin high producing strain47.186

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.169
SRR2868004Drought Stress(Tissue:root)24.583
SRR2967015Control (Tissue:root)21.017

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave25.016
SRR9715740Leave45.042
SRR9715741Leave39.675
SRR9715739Root1.800
SRR9715742Root7.352
SRR9715743Root6.319

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.444
SRR8749028MeJA induced 9h1.336
SRR8749029MeJA induced 9h3.334
SRR8749030Uninduced2.404
SRR8749031Uninduced4.002
SRR8749032Uninduced2.187

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.895
SRR8400027Control-Root5.929

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved