Gene detail information of Glyur000720s00020697.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G62060.1 | 1.00E-131 | Pectinacetylesterase family protein |
| NR | XP_004495849.1 | 0 | PREDICTED: protein notum homolog isoform X1 [Cicer arietinum] |
| trEMBL | tr|V7BGU0|V7BGU0_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW17077.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00720 | 81599 | 86389 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | CE13 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000720s00020697.1 | PF03283.8 | PAE | 39 | 326 | 3.10E-131 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 33.870 |
| SRR1783600 | control | 34.039 |
| SRR1783602 | moderate drought stress | 13.699 |
| SRR1811619 | moderate drought stress | 13.816 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 62.716 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 61.425 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.744 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.774 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.400 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.651 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.517 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.296 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 88.951 |
| SRR2868004 | Drought Stress(Tissue:root) | 34.294 |
| SRR2967015 | Control (Tissue:root) | 49.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 13.336 |
| SRR9715740 | Leave | 1.610 |
| SRR9715741 | Leave | 3.295 |
| SRR9715739 | Root | 21.233 |
| SRR9715742 | Root | 9.668 |
| SRR9715743 | Root | 11.861 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.800 |
| SRR8749028 | MeJA induced 9h | 3.548 |
| SRR8749029 | MeJA induced 9h | 4.771 |
| SRR8749030 | Uninduced | 0.771 |
| SRR8749031 | Uninduced | 0.279 |
| SRR8749032 | Uninduced | 1.791 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 92.418 |
| SRR8400027 | Control-Root | 122.750 |