Gene detail information of Glyur000721s00027417.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G23990.11.00E-138cellulose synthase like G3
NRKEH30968.10cellulose synthase-like protein D3 [Medicago truncatula]
COGYP_007129238.14.00E-18glycosyl transferase family 2 [Gloeocapsa sp. PCC 7428]
Swissprottr|Q8VYR4|CSLG2_ARATH3.00E-164Cellulose synthase-like protein G2
trEMBLtr|A0A072UPM1|A0A072UPM1_MEDTR0Cellulose synthase-like protein D3 {ECO:0000313|EMBL:KEH30968.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007218458687984-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0030244  cellulose biosynthetic process


cellular_component

GO:0016020  membrane


molecular_function

GO:0016760  cellulose synthase (UDP-forming) activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000721s00027417.2PF03552.9Cellulose_synt1023645.80E-70
Glyur000721s00027417.2PF03552.9Cellulose_synt3687121.30E-56


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.297
SRR1783600control2.366
SRR1783602moderate drought stress6.950
SRR1811619moderate drought stress6.846

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.684
DRR006520Root Summer glycyrrhizin high producing strain2.653
DRR006521Root Winter glycyrrhizin high producing strain10.736
DRR006522Root Winter glycyrrhizin high producing strain10.442
DRR006523Root Summer glycyrrhizin low producing strain10.317
DRR006524Root Summer glycyrrhizin low producing strain10.527
DRR006525Leaf Summer glycyrrhizin high producing strain2.727
DRR006526Leaf Summer glycyrrhizin high producing strain3.073

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)52.967
SRR2868004Drought Stress(Tissue:root)79.263
SRR2967015Control (Tissue:root)55.715

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.285
SRR9715740Leave20.027
SRR9715741Leave49.973
SRR9715739Root2.659
SRR9715742Root20.389
SRR9715743Root18.335

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.703
SRR8749028MeJA induced 9h5.447
SRR8749029MeJA induced 9h3.174
SRR8749030Uninduced4.530
SRR8749031Uninduced3.926
SRR8749032Uninduced2.079

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root58.543
SRR8400027Control-Root39.719

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved