Gene detail information of Glyur000721s00027422.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G28440.10HAESA-like 1
NRXP_004505098.10PREDICTED: receptor-like protein kinase HSL1-like [Cicer arietinum]
COGYP_004775215.12.00E-55RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9SGP2|HSL1_ARATH0Receptor-like protein kinase HSL1 (Precursor)
trEMBLtr|A0A072UMH8|A0A072UMH8_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:KEH30979.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00721103190107780-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000721s00027422.1PF08263.7LRRNT_225659.40E-13
Glyur000721s00027422.1PF12799.2LRR_41191568.30E-07
Glyur000721s00027422.1PF13855.1LRR_82152754.50E-08
Glyur000721s00027422.1PF00560.28LRR_15525730.91
Glyur000721s00027422.1PF00560.28LRR_15745930.23
Glyur000721s00027422.1PF00069.20Pkinase6909371.10E-40


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.474
SRR1783600control9.571
SRR1783602moderate drought stress13.667
SRR1811619moderate drought stress13.428

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.217
DRR006520Root Summer glycyrrhizin high producing strain15.916
DRR006521Root Winter glycyrrhizin high producing strain1.713
DRR006522Root Winter glycyrrhizin high producing strain1.694
DRR006523Root Summer glycyrrhizin low producing strain16.916
DRR006524Root Summer glycyrrhizin low producing strain16.746
DRR006525Leaf Summer glycyrrhizin high producing strain6.149
DRR006526Leaf Summer glycyrrhizin high producing strain6.141

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.324
SRR2868004Drought Stress(Tissue:root)25.358
SRR2967015Control (Tissue:root)23.268

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.830
SRR9715740Leave7.975
SRR9715741Leave7.326
SRR9715739Root22.824
SRR9715742Root22.612
SRR9715743Root23.753

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.268
SRR8749028MeJA induced 9h2.245
SRR8749029MeJA induced 9h1.130
SRR8749030Uninduced0.166
SRR8749031Uninduced0.000
SRR8749032Uninduced0.328

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.692
SRR8400027Control-Root23.927

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved