Gene detail information of Glyur000722s00018847.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G19010.10mitogen-activated protein kinase 16
NRXP_007147789.10hypothetical protein PHAVU_006G155300g [Phaseolus vulgaris]
COGYP_003112167.12.00E-27serine/threonine protein kinase [Catenulispora acidiphila DSM 44928]
Swissprottr|Q8W4J2|MPK16_ARATH0Mitogen-activated protein kinase 16
trEMBLtr|V7BRY6|V7BRY6_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW19783.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007227533880601+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004707  MAP kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000722s00018847.1PF00069.20Pkinase253164.80E-68


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.842
SRR1783600control18.926
SRR1783602moderate drought stress9.327
SRR1811619moderate drought stress9.300

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.616
DRR006520Root Summer glycyrrhizin high producing strain20.582
DRR006521Root Winter glycyrrhizin high producing strain1.332
DRR006522Root Winter glycyrrhizin high producing strain1.271
DRR006523Root Summer glycyrrhizin low producing strain26.406
DRR006524Root Summer glycyrrhizin low producing strain26.169
DRR006525Leaf Summer glycyrrhizin high producing strain20.211
DRR006526Leaf Summer glycyrrhizin high producing strain20.101

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)29.405
SRR2868004Drought Stress(Tissue:root)32.380
SRR2967015Control (Tissue:root)38.005

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave49.061
SRR9715740Leave56.255
SRR9715741Leave55.356
SRR9715739Root5.545
SRR9715742Root19.167
SRR9715743Root16.042

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.390
SRR8749028MeJA induced 9h20.970
SRR8749029MeJA induced 9h11.399
SRR8749030Uninduced14.417
SRR8749031Uninduced8.429
SRR8749032Uninduced6.614

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.148
SRR8400027Control-Root34.241

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved