Gene detail information of Glyur000722s00018853.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G35630.35.00E-171glutamine synthetase 2
NRXP_003546121.10PREDICTED: glutamine synthetase leaf isozyme, chloroplastic-like isoform X1 [Glycine max]
COGYP_007566085.15.00E-97glutamine synthetase II [Ilumatobacter coccineus YM16-304]
Swissprottr|P08281|GLNA2_PEA0Glutamine synthetase leaf isozyme, chloroplastic (Precursor)
trEMBLtr|I1MFC4|I1MFC4_SOYBN0Glutamine synthetase {ECO:0000256|RuleBase:RU004356}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00722110348115461+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01915glnA, GLUL EC:6.3.1.2 Biosynthesis of amino acids map01230
Glyoxylate and dicarboxylate metabolismmap00630
Nitrogen metabolismmap00910
Alanine, aspartate and glutamate metabolismmap00250
Arginine biosynthesismap00220
Two-component systemmap02020
Glutamatergic synapsemap04724
GABAergic synapsemap04727


Gene Ontology

biological_process

GO:0006807  nitrogen compound metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0004356  glutamate-ammonia ligase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000722s00018853.2PF00120.19Gln-synt_C72201.70E-50


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.429
SRR1783600control2.451
SRR1783602moderate drought stress1.702
SRR1811619moderate drought stress1.787

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.882
DRR006520Root Summer glycyrrhizin high producing strain8.577
DRR006521Root Winter glycyrrhizin high producing strain0.137
DRR006522Root Winter glycyrrhizin high producing strain0.155
DRR006523Root Summer glycyrrhizin low producing strain6.818
DRR006524Root Summer glycyrrhizin low producing strain6.836
DRR006525Leaf Summer glycyrrhizin high producing strain1477.364
DRR006526Leaf Summer glycyrrhizin high producing strain1473.125

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)79.575
SRR2868004Drought Stress(Tissue:root)32.363
SRR2967015Control (Tissue:root)31.409

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave910.104
SRR9715740Leave1254.927
SRR9715741Leave742.435
SRR9715739Root6.216
SRR9715742Root5.897
SRR9715743Root4.923

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h34.413
SRR8749028MeJA induced 9h30.750
SRR8749029MeJA induced 9h12.611
SRR8749030Uninduced1.397
SRR8749031Uninduced0.275
SRR8749032Uninduced2.153

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root24.104
SRR8400027Control-Root27.982

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved