Gene detail information of Glyur000723s00020864.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G04920.10sucrose phosphate synthase 3F
NRXP_003545147.10PREDICTED: probable sucrose-phosphate synthase 3-like [Glycine max]
COGYP_003529338.18.00E-122sucrose-phosphate synthase [Nitrosococcus halophilus Nc 4]
Swissprottr|Q8RY24|SPSA3_ARATH0Probable sucrose-phosphate synthase 3
trEMBLtr|I1M6Y2|I1M6Y2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G03300.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007231301719351-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00696E2.4.1.14 EC:2.4.1.14 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005985  sucrose metabolic process

GO:0009058  biosynthetic process


molecular_function

GO:0046524  sucrose-phosphate synthase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000723s00020864.1PF13579.1Glyco_trans_4_41783762.50E-10
Glyur000723s00020864.1PF00534.15Glycos_transf_14636384.70E-27


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.180
SRR1783600control1.192
SRR1783602moderate drought stress0.850
SRR1811619moderate drought stress0.895

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.450
DRR006520Root Summer glycyrrhizin high producing strain0.527
DRR006521Root Winter glycyrrhizin high producing strain6.095
DRR006522Root Winter glycyrrhizin high producing strain6.093
DRR006523Root Summer glycyrrhizin low producing strain0.779
DRR006524Root Summer glycyrrhizin low producing strain0.875
DRR006525Leaf Summer glycyrrhizin high producing strain96.923
DRR006526Leaf Summer glycyrrhizin high producing strain95.319

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.524
SRR2868004Drought Stress(Tissue:root)0.422
SRR2967015Control (Tissue:root)0.437

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave33.914
SRR9715740Leave46.614
SRR9715741Leave25.393
SRR9715739Root0.134
SRR9715742Root0.706
SRR9715743Root0.310

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.415
SRR8749028MeJA induced 9h0.423
SRR8749029MeJA induced 9h0.506
SRR8749030Uninduced0.104
SRR8749031Uninduced0.049
SRR8749032Uninduced0.062

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.043
SRR8400027Control-Root3.886

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved