Gene detail information of Glyur000723s00020880.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G06570.12.00E-159phytoene desaturation 1
NRXP_004491317.10PREDICTED: 4-hydroxyphenylpyruvate dioxygenase-like [Cicer arietinum]
COGNP_842794.12.00E-754-hydroxyphenylpyruvate dioxygenase [Bacillus anthracis str. Ames]
Swissprottr|P93836|HPPD_ARATH04-hydroxyphenylpyruvate dioxygenase
trEMBLtr|Q56H33|Q56H33_MEDTR04-hydroxyphenylpyruvate dioxygenase {ECO:0000256|PIRNR:PIRNR009283}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00723100745103824-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00457HPD, hppD EC:1.13.11.27 Tyrosine metabolism map00350
Phenylalanine metabolismmap00360
Ubiquinone and other terpenoid-quinone biosynthesismap00130


Gene Ontology

biological_process

GO:0009072  aromatic amino acid family metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0003868  4-hydroxyphenylpyruvate dioxygenase activity

GO:0016701  oxidoreductase activity, acting on single donors with incorporation of molecular oxygen


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000723s00020880.1PF00903.20Glyoxalase2834391.20E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.375
SRR1783600control18.769
SRR1783602moderate drought stress49.928
SRR1811619moderate drought stress49.742

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.261
DRR006520Root Summer glycyrrhizin high producing strain12.030
DRR006521Root Winter glycyrrhizin high producing strain107.381
DRR006522Root Winter glycyrrhizin high producing strain104.233
DRR006523Root Summer glycyrrhizin low producing strain14.853
DRR006524Root Summer glycyrrhizin low producing strain15.582
DRR006525Leaf Summer glycyrrhizin high producing strain53.409
DRR006526Leaf Summer glycyrrhizin high producing strain53.943

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)32.943
SRR2868004Drought Stress(Tissue:root)59.753
SRR2967015Control (Tissue:root)85.478

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave58.412
SRR9715740Leave68.853
SRR9715741Leave95.607
SRR9715739Root28.496
SRR9715742Root40.823
SRR9715743Root38.536

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h45.909
SRR8749028MeJA induced 9h181.905
SRR8749029MeJA induced 9h77.065
SRR8749030Uninduced137.896
SRR8749031Uninduced300.458
SRR8749032Uninduced223.710

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.107
SRR8400027Control-Root27.528

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved