Gene detail information of Glyur000726s00027895.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G50510.13.00E-107indigoidine synthase A family protein
NRXP_004516912.13.43E-175PREDICTED: pseudouridine-5'-phosphate glycosidase-like isoform X1 [Cicer arietinum]
COGYP_002769853.19.00E-89hypothetical protein BBR47_03720 [Brevibacillus brevis NBRC 100599]
trEMBLtr|I1KZR9|I1KZR9_SOYBN8.00E-169Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G00500.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007268762299879-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K16329psuG EC:4.2.1.70 Pyrimidine metabolism map00240


Gene Ontology

molecular_function

GO:0016798  hydrolase activity, acting on glycosyl bonds



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000726s00027895.1PF04227.7Indigoidine_A612303.40E-76
Glyur000726s00027895.1PF04227.7Indigoidine_A2313185.00E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.602
SRR1783600control5.415
SRR1783602moderate drought stress7.242
SRR1811619moderate drought stress6.997

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.061
DRR006520Root Summer glycyrrhizin high producing strain12.163
DRR006521Root Winter glycyrrhizin high producing strain7.445
DRR006522Root Winter glycyrrhizin high producing strain7.076
DRR006523Root Summer glycyrrhizin low producing strain14.204
DRR006524Root Summer glycyrrhizin low producing strain14.296
DRR006525Leaf Summer glycyrrhizin high producing strain7.003
DRR006526Leaf Summer glycyrrhizin high producing strain7.011

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.756
SRR2868004Drought Stress(Tissue:root)12.921
SRR2967015Control (Tissue:root)14.375

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.393
SRR9715740Leave7.918
SRR9715741Leave8.512
SRR9715739Root2.201
SRR9715742Root5.164
SRR9715743Root3.179

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.040
SRR8749028MeJA induced 9h7.528
SRR8749029MeJA induced 9h14.751
SRR8749030Uninduced6.160
SRR8749031Uninduced5.910
SRR8749032Uninduced9.026

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.721
SRR8400027Control-Root17.367

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved