Gene detail information of Glyur000726s00027898.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G66340.10Signal transduction histidine kinase, hybrid-type, ethylene sensor
NRXP_004515180.10PREDICTED: ethylene receptor-like isoform X2 [Cicer arietinum]
COGYP_007109317.11.00E-63multi-sensor hybrid histidine kinase [Geitlerinema sp. PCC 7407]
Swissprottr|O81122|ETR1_MALDO0Ethylene receptor
trEMBLtr|I1LVH5|I1LVH5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G37050.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00726112579119853-


Gene family

Gene familysubfamily
Transcription Factors FamilyOrphans


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14509ETR, ERS EC:2.7.13.- MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075


Gene Ontology

biological_process

GO:0000160  phosphorelay signal transduction system

GO:0007165  signal transduction


cellular_component

GO:0016020  membrane


molecular_function

GO:0000155  phosphorelay sensor kinase activity

GO:0004871  signal transducer activity

GO:0005515  protein binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000726s00027898.1PF01590.21GAF1583074.20E-14
Glyur000726s00027898.1PF00512.20HisKA3444082.60E-17
Glyur000726s00027898.1PF02518.21HATPase_c4555601.10E-12
Glyur000726s00027898.1PF00072.19Response_reg5927033.00E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.751
SRR1783600control6.739
SRR1783602moderate drought stress6.347
SRR1811619moderate drought stress6.517

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.018
DRR006520Root Summer glycyrrhizin high producing strain9.036
DRR006521Root Winter glycyrrhizin high producing strain13.274
DRR006522Root Winter glycyrrhizin high producing strain13.179
DRR006523Root Summer glycyrrhizin low producing strain10.656
DRR006524Root Summer glycyrrhizin low producing strain10.565
DRR006525Leaf Summer glycyrrhizin high producing strain8.832
DRR006526Leaf Summer glycyrrhizin high producing strain8.986

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.050
SRR2868004Drought Stress(Tissue:root)20.202
SRR2967015Control (Tissue:root)15.015

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.273
SRR9715740Leave8.931
SRR9715741Leave9.482
SRR9715739Root2.462
SRR9715742Root8.012
SRR9715743Root6.286

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.666
SRR8749028MeJA induced 9h10.922
SRR8749029MeJA induced 9h7.815
SRR8749030Uninduced9.501
SRR8749031Uninduced8.202
SRR8749032Uninduced4.909

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.672
SRR8400027Control-Root17.244

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved