Gene detail information of Glyur000727s00025947.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38620.1 | 8.00E-59 | myb domain protein 4 |
| NR | XP_004490862.1 | 7.71E-109 | PREDICTED: transcription factor MYB3-like [Cicer arietinum] |
| Swissprot | tr|Q9SZP1|MYB4_ARATH | 2.00E-72 | Transcription repressor MYB4 |
| trEMBL | tr|C6SZ67|C6SZ67_SOYBN | 6.00E-102 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G41440.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00727 | 65711 | 67562 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000727s00025947.1 | PF00249.26 | Myb_DNA-binding | 13 | 60 | 2.90E-15 |
| Glyur000727s00025947.1 | PF00249.26 | Myb_DNA-binding | 67 | 110 | 4.70E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.043 |
| SRR1783600 | control | 0.043 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.721 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.336 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.028 |
| SRR2967015 | Control (Tissue:root) | 0.151 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 14.896 |
| SRR9715740 | Leave | 30.751 |
| SRR9715741 | Leave | 11.678 |
| SRR9715739 | Root | 0.113 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.320 |
| SRR8749028 | MeJA induced 9h | 0.354 |
| SRR8749029 | MeJA induced 9h | 0.072 |
| SRR8749030 | Uninduced | 0.726 |
| SRR8749031 | Uninduced | 1.535 |
| SRR8749032 | Uninduced | 2.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.159 |
| SRR8400027 | Control-Root | 0.157 |