Gene detail information of Glyur000727s00025951.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G37850.2 | 3.00E-144 | pfkB-like carbohydrate kinase family protein |
| NR | XP_004490860.1 | 0 | PREDICTED: pyridoxal kinase-like isoform X2 [Cicer arietinum] |
| COG | NP_950686.1 | 2.00E-47 | pyridoxal/pyridoxine/pyridoxamine kinase [Onion yellows phytoplasma OY-M] |
| Swissprot | tr|Q8W1X2|PDXK_ARATH | 1.00E-180 | Pyridoxal kinase |
| trEMBL | tr|G7KBP7|G7KBP7_MEDTR | 0 | Pyridoxal kinase {ECO:0000313|EMBL:AES99350.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00727 | 82809 | 88482 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00868 | pdxK, pdxY | EC:2.7.1.35 | Vitamin B6 metabolism | map00750 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000727s00025951.1 | PF08543.7 | Phos_pyr_kin | 176 | 326 | 3.10E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.663 |
| SRR1783600 | control | 20.685 |
| SRR1783602 | moderate drought stress | 16.975 |
| SRR1811619 | moderate drought stress | 16.408 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.469 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.309 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 33.316 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 32.878 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 30.143 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.599 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.664 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.544 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 38.142 |
| SRR2868004 | Drought Stress(Tissue:root) | 42.573 |
| SRR2967015 | Control (Tissue:root) | 38.436 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 16.031 |
| SRR9715740 | Leave | 14.689 |
| SRR9715741 | Leave | 20.429 |
| SRR9715739 | Root | 5.499 |
| SRR9715742 | Root | 11.203 |
| SRR9715743 | Root | 7.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 98.809 |
| SRR8749028 | MeJA induced 9h | 65.119 |
| SRR8749029 | MeJA induced 9h | 159.967 |
| SRR8749030 | Uninduced | 139.323 |
| SRR8749031 | Uninduced | 299.071 |
| SRR8749032 | Uninduced | 243.496 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 34.555 |
| SRR8400027 | Control-Root | 29.645 |