Gene detail information of Glyur000727s00025953.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G07570.25.00E-140Protein kinase superfamily protein
NRXP_003616403.10Serine/threonine protein kinase [Medicago truncatula]
COGYP_001958461.12.00E-20hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q06548|APK1A_ARATH6.00E-173Protein kinase APK1A, chloroplastic (Precursor)
trEMBLtr|G7KBQ8|G7KBQ8_MEDTR0Kinase 1B {ECO:0000313|EMBL:AES99361.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00727107337110727+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000727s00025953.1PF07714.12Pkinase_Tyr813642.40E-40


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.867
SRR1783600control7.904
SRR1783602moderate drought stress13.326
SRR1811619moderate drought stress13.260

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.465
DRR006520Root Summer glycyrrhizin high producing strain7.704
DRR006521Root Winter glycyrrhizin high producing strain28.331
DRR006522Root Winter glycyrrhizin high producing strain26.797
DRR006523Root Summer glycyrrhizin low producing strain18.943
DRR006524Root Summer glycyrrhizin low producing strain18.651
DRR006525Leaf Summer glycyrrhizin high producing strain10.792
DRR006526Leaf Summer glycyrrhizin high producing strain10.951

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)32.572
SRR2868004Drought Stress(Tissue:root)46.243
SRR2967015Control (Tissue:root)62.957

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave28.739
SRR9715740Leave18.886
SRR9715741Leave36.948
SRR9715739Root4.436
SRR9715742Root13.541
SRR9715743Root11.884

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h63.679
SRR8749028MeJA induced 9h66.762
SRR8749029MeJA induced 9h74.267
SRR8749030Uninduced35.854
SRR8749031Uninduced33.829
SRR8749032Uninduced28.626

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.616
SRR8400027Control-Root19.177

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved