Gene detail information of Glyur000730s00036461.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G66230.1 | 5.00E-70 | myb domain protein 20 |
| NR | XP_003538391.1 | 5.96E-158 | PREDICTED: protein ODORANT1 [Glycine max] |
| Swissprot | tr|Q50EX6|ODO1_PETHY | 3.00E-82 | Protein ODORANT1 |
| trEMBL | tr|I1LMB7|I1LMB7_SOYBN | 2.00E-158 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G33620.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00730 | 31554 | 33818 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000730s00036461.1 | PF00249.26 | Myb_DNA-binding | 15 | 61 | 2.10E-11 |
| Glyur000730s00036461.1 | PF00249.26 | Myb_DNA-binding | 71 | 111 | 1.00E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.818 |
| SRR1783600 | control | 0.881 |
| SRR1783602 | moderate drought stress | 2.503 |
| SRR1811619 | moderate drought stress | 2.431 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.682 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.742 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.092 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.090 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.711 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.968 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.079 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 11.459 |
| SRR2868004 | Drought Stress(Tissue:root) | 16.188 |
| SRR2967015 | Control (Tissue:root) | 14.335 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 92.669 |
| SRR9715740 | Leave | 70.440 |
| SRR9715741 | Leave | 90.517 |
| SRR9715739 | Root | 1.088 |
| SRR9715742 | Root | 12.096 |
| SRR9715743 | Root | 10.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.348 |
| SRR8749028 | MeJA induced 9h | 0.636 |
| SRR8749029 | MeJA induced 9h | 0.152 |
| SRR8749030 | Uninduced | 1.098 |
| SRR8749031 | Uninduced | 0.032 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 14.906 |
| SRR8400027 | Control-Root | 3.918 |