Gene detail information of Glyur000731s00024676.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G45040.12.00E-158phosphatidate cytidylyltransferase family protein
NRXP_003638051.10Dolichol kinase [Medicago truncatula]
trEMBLtr|G8A151|G8A151_MEDTR0Phosphatidate cytidylyltransferase family protein {ECO:0000313|EMBL:KEH39386.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007313634343442+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00902E2.7.1.108 EC:2.7.1.108 N-Glycan biosynthesis map00510


Gene Ontology

biological_process

GO:0043048  dolichyl monophosphate biosynthetic process


cellular_component

GO:0030176  integral component of endoplasmic reticulum membrane


molecular_function

GO:0004168  dolichol kinase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
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Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.715
SRR1783600control9.685
SRR1783602moderate drought stress10.079
SRR1811619moderate drought stress10.124

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.233
DRR006520Root Summer glycyrrhizin high producing strain8.553
DRR006521Root Winter glycyrrhizin high producing strain16.477
DRR006522Root Winter glycyrrhizin high producing strain16.090
DRR006523Root Summer glycyrrhizin low producing strain23.835
DRR006524Root Summer glycyrrhizin low producing strain24.064
DRR006525Leaf Summer glycyrrhizin high producing strain11.603
DRR006526Leaf Summer glycyrrhizin high producing strain11.610

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.771
SRR2868004Drought Stress(Tissue:root)20.370
SRR2967015Control (Tissue:root)16.319

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave44.754
SRR9715740Leave35.926
SRR9715741Leave60.712
SRR9715739Root9.687
SRR9715742Root15.006
SRR9715743Root13.012

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.972
SRR8749028MeJA induced 9h31.937
SRR8749029MeJA induced 9h17.908
SRR8749030Uninduced30.385
SRR8749031Uninduced32.572
SRR8749032Uninduced24.840

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.026
SRR8400027Control-Root12.318

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved