Gene detail information of Glyur000731s00024683.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G57620.1 | 6.00E-62 | myb domain protein 36 |
| NR | XP_007150152.1 | 7.08E-121 | hypothetical protein PHAVU_005G131300g [Phaseolus vulgaris] |
| Swissprot | tr|Q9SJL7|RAX2_ARATH | 4.00E-73 | Transcription factor RAX2 |
| trEMBL | tr|V7BZV3|V7BZV3_PHAVU | 3.00E-121 | Uncharacterized protein {ECO:0000313|EMBL:ESW22146.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00731 | 78897 | 80695 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000731s00024683.1 | PF00249.26 | Myb_DNA-binding | 71 | 119 | 1.60E-14 |
| Glyur000731s00024683.1 | PF00249.26 | Myb_DNA-binding | 126 | 168 | 1.10E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.347 |
| SRR1783600 | control | 13.522 |
| SRR1783602 | moderate drought stress | 13.331 |
| SRR1811619 | moderate drought stress | 12.666 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.089 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.088 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 42.477 |
| SRR2868004 | Drought Stress(Tissue:root) | 52.346 |
| SRR2967015 | Control (Tissue:root) | 77.402 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.157 |
| SRR9715741 | Leave | 0.654 |
| SRR9715739 | Root | 9.133 |
| SRR9715742 | Root | 8.562 |
| SRR9715743 | Root | 9.625 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.406 |
| SRR8749028 | MeJA induced 9h | 14.470 |
| SRR8749029 | MeJA induced 9h | 2.401 |
| SRR8749030 | Uninduced | 14.065 |
| SRR8749031 | Uninduced | 0.120 |
| SRR8749032 | Uninduced | 0.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 36.243 |
| SRR8400027 | Control-Root | 33.503 |