Gene detail information of Glyur000733s00026527.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G50530.10CDPK-related kinase
NRAET04065.20calmodulin-domain kinase CDPK protein [Medicago truncatula]
COGYP_003339135.17.00E-15serine/threonine protein kinase-like protein [Streptosporangium roseum DSM 43021]
Swissprottr|Q9SCS2|CAMK5_ARATH0CDPK-related kinase 5
trEMBLtr|G7LGE1|G7LGE1_MEDTR0Calmodulin-domain kinase CDPK protein {ECO:0000313|EMBL:AET04065.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00733118733122774-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000733s00026527.1PF00069.20Pkinase1422946.10E-35
Glyur000733s00026527.1PF00069.20Pkinase3013551.80E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control32.819
SRR1783600control32.635
SRR1783602moderate drought stress25.559
SRR1811619moderate drought stress25.824

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.585
DRR006520Root Summer glycyrrhizin high producing strain15.342
DRR006521Root Winter glycyrrhizin high producing strain2.689
DRR006522Root Winter glycyrrhizin high producing strain2.644
DRR006523Root Summer glycyrrhizin low producing strain13.394
DRR006524Root Summer glycyrrhizin low producing strain13.439
DRR006525Leaf Summer glycyrrhizin high producing strain11.311
DRR006526Leaf Summer glycyrrhizin high producing strain10.979

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.991
SRR2868004Drought Stress(Tissue:root)15.802
SRR2967015Control (Tissue:root)14.907

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.243
SRR9715740Leave7.068
SRR9715741Leave8.554
SRR9715739Root15.540
SRR9715742Root29.458
SRR9715743Root25.507

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.310
SRR8749028MeJA induced 9h8.342
SRR8749029MeJA induced 9h3.437
SRR8749030Uninduced1.983
SRR8749031Uninduced0.902
SRR8749032Uninduced0.644

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root36.165
SRR8400027Control-Root36.165

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved