Gene detail information of Glyur000734s00026311.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G53050.10Protein kinase superfamily protein
NRXP_003607463.10hypothetical protein MTR_4g078290 [Medicago truncatula]
COGYP_003267965.17.00E-23serine/threonine protein kinase [Haliangium ochraceum DSM 14365]
Swissprottr|Q9ZVM9|Y1461_ARATH0Probable serine/threonine-protein kinase At1g54610
trEMBLtr|G7JTT1|G7JTT1_MEDTR0Cyclin-dependent kinase {ECO:0000313|EMBL:AES89660.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007342610932548-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000734s00026311.1PF00069.20Pkinase1364197.40E-68


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.477
SRR1783600control7.594
SRR1783602moderate drought stress6.905
SRR1811619moderate drought stress6.971

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.612
DRR006520Root Summer glycyrrhizin high producing strain15.421
DRR006521Root Winter glycyrrhizin high producing strain23.157
DRR006522Root Winter glycyrrhizin high producing strain22.308
DRR006523Root Summer glycyrrhizin low producing strain37.116
DRR006524Root Summer glycyrrhizin low producing strain36.828
DRR006525Leaf Summer glycyrrhizin high producing strain14.024
DRR006526Leaf Summer glycyrrhizin high producing strain13.747

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.187
SRR2868004Drought Stress(Tissue:root)40.423
SRR2967015Control (Tissue:root)34.104

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave58.196
SRR9715740Leave51.722
SRR9715741Leave66.774
SRR9715739Root3.790
SRR9715742Root34.266
SRR9715743Root28.194

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h61.759
SRR8749028MeJA induced 9h91.557
SRR8749029MeJA induced 9h76.781
SRR8749030Uninduced125.404
SRR8749031Uninduced121.914
SRR8749032Uninduced73.366

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.174
SRR8400027Control-Root20.765

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved