Gene detail information of Glyur000735s00021569.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G57810.34.00E-37Cysteine proteinases superfamily protein
NRXP_004496177.13.88E-166PREDICTED: OTU domain-containing protein At3g57810-like [Cicer arietinum]
Swissprottr|Q8LBZ4|OTU_ARATH2.00E-54OTU domain-containing protein At3g57810
trEMBLtr|Q2PEU4|Q2PEU4_TRIPR6.00E-155Putative uncharacterized protein {ECO:0000313|EMBL:BAE71258.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold007353763840577-


Gene family

Gene familysubfamily
Ubiquitin FamilyOTU


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000735s00021569.1PF02338.14OTU1773042.40E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.109
SRR1783600control10.391
SRR1783602moderate drought stress6.974
SRR1811619moderate drought stress6.459

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.917
DRR006520Root Summer glycyrrhizin high producing strain13.429
DRR006521Root Winter glycyrrhizin high producing strain7.415
DRR006522Root Winter glycyrrhizin high producing strain7.907
DRR006523Root Summer glycyrrhizin low producing strain9.078
DRR006524Root Summer glycyrrhizin low producing strain9.236
DRR006525Leaf Summer glycyrrhizin high producing strain13.572
DRR006526Leaf Summer glycyrrhizin high producing strain13.178

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)21.878
SRR2868004Drought Stress(Tissue:root)15.793
SRR2967015Control (Tissue:root)13.474

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.004
SRR9715740Leave11.875
SRR9715741Leave10.727
SRR9715739Root11.162
SRR9715742Root14.671
SRR9715743Root12.566

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.525
SRR8749028MeJA induced 9h9.519
SRR8749029MeJA induced 9h22.683
SRR8749030Uninduced13.359
SRR8749031Uninduced9.191
SRR8749032Uninduced19.218

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.806
SRR8400027Control-Root34.422

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved